Conservation of cofitness between ECD_01774 and ECD_02116 in Escherichia coli BL21

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01774 ribonuclease D 1.0 ECD_02116 spermidine nucleoid-associated protein 0.65 11
Escherichia coli BW25113 1.00 b1804 rnd ribonuclease D (NCBI) 1.00 b2186 yejK nucleoid-associated protein NdpA (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01929 Ribonuclease D 1.00 OHPLBJKB_01523 Nucleoid-associated protein YejK low > 73
Escherichia coli ECRC99 0.99 KEDOAH_01505 rnd ribonuclease D 0.99 KEDOAH_04840 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC101 0.99 MCAODC_18805 rnd ribonuclease D 0.99 MCAODC_14395 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC98 0.99 JDDGAC_01180 rnd ribonuclease D 0.99 JDDGAC_27305 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC102 0.99 NIAGMN_01460 rnd ribonuclease D 0.99 NIAGMN_21110 yejK nucleoid-associated protein YejK — —
Escherichia coli ECOR27 0.99 NOLOHH_17125 rnd ribonuclease D 0.99 NOLOHH_14920 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC62 0.99 BNILDI_15910 rnd ribonuclease D 0.99 BNILDI_13840 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC101 0.99 OKFHMN_26605 rnd ribonuclease D 0.99 OKFHMN_23345 yejK nucleoid-associated protein YejK — —
Escherichia coli ECOR38 0.98 HEPCGN_04995 rnd ribonuclease D 0.99 HEPCGN_22610 yejK nucleoid-associated protein YejK low > 85
Escherichia fergusonii Becca 0.98 EFB2_02196 Ribonuclease D 0.99 EFB2_01670 Nucleoid-associated protein YejK low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10035 ribonuclease D 0.99 ECOLIN_RS12775 nucleoid-associated protein YejK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF2819 Ribonuclease D (EC 3.1.26.3) 0.97 GFF3749 Nucleoid-associated protein NdpA low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_02710 Ribonuclease D 0.94 MPMX20_03152 Nucleoid-associated protein YejK low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0755 ribonuclease D 0.94 EX28DRAFT_0375 Nucleoid-associated protein low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS17795 ribonuclease D 0.92 BWI76_RS19835 nucleoid-associated protein YejK low > 92
Dickeya dadantii 3937 0.69 DDA3937_RS11220 ribonuclease D 0.81 DDA3937_RS09125 nucleoid-associated protein YejK low > 74
Serratia liquefaciens MT49 0.68 IAI46_14530 ribonuclease D 0.80 IAI46_17360 nucleoid-associated protein YejK low > 86
Rahnella sp. WP5 0.68 EX31_RS10595 ribonuclease D 0.81 EX31_RS19210 nucleoid-associated protein YejK low > 89
Pectobacterium carotovorum WPP14 0.68 HER17_RS11270 ribonuclease D 0.82 HER17_RS12975 nucleoid-associated protein YejK low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS11255 ribonuclease D 0.81 HGI48_RS09165 nucleoid-associated protein YejK 0.56 56
Dickeya dianthicola ME23 0.67 DZA65_RS11600 ribonuclease D 0.81 DZA65_RS09465 nucleoid-associated protein YejK low > 75
Pantoea sp. MT58 0.66 IAI47_08840 ribonuclease D 0.81 IAI47_06570 nucleoid-associated protein YejK low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS13130 rnd ribonuclease D 0.79 LU632_RS17610 yejK nucleoid-associated protein YejK low > 74
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_09900 ribonuclease D 0.51 CSW01_10190 nucleoid-associated protein low > 62
Shewanella loihica PV-4 0.38 Shew_2187 ribonuclease D (RefSeq) 0.46 Shew_1472 nucleoid-associated protein NdpA (RefSeq) low > 60
Shewanella sp. ANA-3 0.36 Shewana3_2385 ribonuclease D (RefSeq) 0.45 Shewana3_2426 nucleoid-associated protein NdpA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO2580 rnd ribonuclease D (NCBI ptt file) 0.44 SO2177 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.36 MIT1002_02587 Ribonuclease D 0.36 MIT1002_01983 Nucleoid-associated protein YejK low > 70
Shewanella amazonensis SB2B 0.35 Sama_1933 ribonuclease D (RefSeq) 0.46 Sama_1557 nucleoid-associated protein NdpA (RefSeq) low > 62
Pseudomonas sp. S08-1 0.30 OH686_05315 ribonuclease D 0.31 OH686_17845 Nucleoid-associated protein NdpA low > 80
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_04420 ribonuclease D 0.30 AO356_17440 nucleoid-associated protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) 0.30 Pf6N2E2_5414 Nucleoid-associated protein low > 103
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1563 Ribonuclease D 0.31 Psyr_1083 37kDa nucleoid-associated bacterial protein low > 86
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) 0.30 PfGW456L13_1708 Nucleoid-associated protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1563 Ribonuclease D 0.31 Psyr_1083 37kDa nucleoid-associated bacterial protein low > 86
Pseudomonas sp. RS175 0.30 PFR28_00712 Ribonuclease D 0.30 PFR28_03534 Nucleoid-associated protein YejK low > 88
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_17855 ribonuclease D 0.30 AO353_04565 nucleoid-associated protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) 0.30 Pf1N1B4_905 Nucleoid-associated protein low > 87
Pseudomonas putida KT2440 0.30 PP_4591 Ribonuclease D 0.31 PP_0973 Nucleoid-associated protein PP_0973 low > 96
Pseudomonas stutzeri RCH2 0.29 Psest_2995 ribonuclease D 0.29 Psest_1222 Nucleoid-associated protein — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS07465 ribonuclease D 0.30 PFLU_RS05205 nucleoid-associated protein YejK low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS07465 ribonuclease D 0.30 PFLU_RS05205 nucleoid-associated protein YejK low > 109
Pseudomonas simiae WCS417 0.29 PS417_07375 ribonuclease D 0.30 PS417_05135 nucleoid-associated protein low > 88
Marinobacter adhaerens HP15 0.22 HP15_1882 ribonuclease D 0.19 HP15_2464 nucleoid-associated protein NdpA low > 73

Not shown: 21 genomes with orthologs for ECD_01774 only; 0 genomes with orthologs for ECD_02116 only