Conservation of cofitness between ECD_00971 and ECD_01077 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 1.0 ECD_01077 flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase 0.60 7
Escherichia coli BW25113 1.00 b0967 yccW predicted methyltransferase (RefSeq) 1.00 b1081 flgJ flagellar biosynthesis protein FlgJ (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 ECOLIN_RS06255 flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECOR27 0.99 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 NOLOHH_21165 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 1.00 OHPLBJKB_02584 Peptidoglycan hydrolase FlgJ low > 73
Escherichia coli ECRC100 0.98 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 OKFHMN_03635 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 80
Escherichia coli ECRC98 0.98 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 JDDGAC_07295 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 86
Escherichia coli ECRC62 0.98 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 BNILDI_19325 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 75
Escherichia coli ECRC101 0.98 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 MCAODC_22995 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 87
Escherichia coli ECRC99 0.98 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 KEDOAH_24120 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia coli ECRC102 0.98 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 NIAGMN_24195 flgJ flagellar assembly peptidoglycan hydrolase FlgJ — —
Escherichia fergusonii Becca 0.98 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.99 EFB2_02893 Peptidoglycan hydrolase FlgJ low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.76 EX28DRAFT_1851 flagellar rod assembly protein/muramidase FlgJ low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.75 MPMX20_01760 Peptidoglycan hydrolase FlgJ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF3258 LSU m5C1962 methyltransferase RlmI 0.81 GFF3362 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) low > 78
Pantoea sp. MT58 0.87 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.61 IAI47_12125 flagellar assembly peptidoglycan hydrolase FlgJ low > 76
Serratia liquefaciens MT49 0.85 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.56 IAI46_15920 flagellar assembly peptidoglycan hydrolase FlgJ low > 86
Erwinia tracheiphila SCR3 0.83 LU632_RS10090 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.60 LU632_RS10435 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 74
Rahnella sp. WP5 0.82 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.50 EX31_RS11275 flagellar assembly peptidoglycan hydrolase FlgJ low > 89
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.24 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ low > 62
Shewanella amazonensis SB2B 0.61 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) 0.18 Sama_2310 flgJ flagellar rod assembly protein/muramidase FlgJ (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.56 MIT1002_01688 Ribosomal RNA large subunit methyltransferase I 0.28 MIT1002_01049 Peptidoglycan hydrolase FlgJ low > 70
Dechlorosoma suillum PS 0.48 Dsui_0653 putative SAM-dependent methyltransferase 0.32 Dsui_1740 flagellar rod assembly protein/muramidase FlgJ low > 51
Ralstonia solanacearum GMI1000 0.47 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.32 RS_RS18835 flagellar assembly peptidoglycan hydrolase FlgJ low > 80
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase 0.34 QEN71_RS28880 flagellar assembly peptidoglycan hydrolase FlgJ 0.68 40
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase 0.32 H281DRAFT_05770 flagellar protein FlgJ low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.31 ABIE53_000093 flagellar protein FlgJ low > 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS01650 23S rRNA methyltransferase 0.33 BPHYT_RS18855 flagellar rod assembly protein FlgJ low > 109
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS01670 23S rRNA methyltransferase 0.36 RR42_RS35685 flagellar rod assembly protein FlgJ low > 128
Variovorax sp. SCN45 0.40 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.32 GFF5723 Flagellar protein FlgJ [peptidoglycan hydrolase] low > 127
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2000 LSU m5C1962 methyltransferase RlmI 0.30 Ac3H11_1367 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) low > 79
Lysobacter sp. OAE881 0.31 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase 0.24 ABIE51_RS16710 flagellar assembly peptidoglycan hydrolase FlgJ low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase 0.24 ABZR86_RS20115 flagellar assembly peptidoglycan hydrolase FlgJ low > 74
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS06920 class I SAM-dependent rRNA methyltransferase 0.24 LRK54_RS13445 flagellar assembly peptidoglycan hydrolase FlgJ low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS06665 class I SAM-dependent rRNA methyltransferase 0.24 LRK55_RS13185 flagellar assembly peptidoglycan hydrolase FlgJ low > 63
Marinobacter adhaerens HP15 0.26 HP15_460 SAM-dependent methyltransferase 0.29 HP15_1475 flagellar rod assembly protein/muramidase FlgJ low > 73
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_16710 rlmK RlmI/RlmK family 23S rRNA methyltransferase 0.24 OKGIIK_02690 flgJ flagellar assembly peptidoglycan hydrolase FlgJ low > 52

Not shown: 45 genomes with orthologs for ECD_00971 only; 8 genomes with orthologs for ECD_01077 only