Conservation of cofitness between ECD_00078 and ECD_00760 in Escherichia coli BL21

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00078 global transcription factor 1.0 ECD_00760 putative ABC transporter permease 0.55 21
Escherichia coli BW25113 1.00 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) 1.00 b0793 ybhS predicted transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_08560 leuO transcriptional regulator LeuO 1.00 BNILDI_20945 ybhS putative multidrug ABC transporter permease YbhS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO 1.00 OHPLBJKB_02920 putative multidrug ABC transporter permease YbhS low > 73
Escherichia coli ECOR27 0.99 NOLOHH_03050 leuO transcriptional regulator LeuO 1.00 NOLOHH_22665 ybhS putative multidrug ABC transporter permease YbhS low > 75
Escherichia coli ECRC98 0.99 JDDGAC_14300 leuO transcriptional regulator LeuO 1.00 JDDGAC_09945 ybhS putative multidrug ABC transporter permease YbhS low > 86
Escherichia coli ECRC102 0.99 NIAGMN_08555 leuO transcriptional regulator LeuO 1.00 NIAGMN_04355 ybhS putative multidrug ABC transporter permease YbhS
Escherichia coli ECRC99 0.99 KEDOAH_17450 leuO transcriptional regulator LeuO 1.00 KEDOAH_21600 ybhS putative multidrug ABC transporter permease YbhS
Escherichia fergusonii Becca 0.99 EFB2_03970 HTH-type transcriptional regulator LeuO 1.00 EFB2_03312 putative multidrug ABC transporter permease YbhS low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00410 transcriptional regulator LeuO 1.00 ECOLIN_RS26290 ABC transporter permease
Escherichia coli ECRC101 0.99 MCAODC_01220 leuO transcriptional regulator LeuO 1.00 MCAODC_25525 ybhS putative multidrug ABC transporter permease YbhS low > 87
Escherichia coli ECRC100 0.99 OKFHMN_10705 leuO transcriptional regulator LeuO 1.00 OKFHMN_06310 ybhS putative multidrug ABC transporter permease YbhS low > 80
Escherichia coli ECOR38 0.99 HEPCGN_08685 leuO transcriptional regulator LeuO 1.00 HEPCGN_01730 ybhS putative multidrug ABC transporter permease YbhS low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF162 Probable transcriptional activator for leuABCD operon 0.93 GFF692 ABC transport system, permease component YbhS low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3672 Transcriptional regulator 0.93 EX28DRAFT_2198 ABC-type multidrug transport system, permease component low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS04690 transcriptional regulator LeuO 0.91 BWI76_RS08870 inner membrane transport permease YbhS low > 92
Enterobacter sp. TBS_079 0.81 MPMX20_00770 HTH-type transcriptional regulator LeuO 0.94 MPMX20_01421 putative multidrug ABC transporter permease YbhS low > 85
Serratia liquefaciens MT49 0.56 IAI46_03365 transcriptional regulator LeuO 0.81 IAI46_06600 ABC transporter permease low > 86
Rahnella sp. WP5 0.55 EX31_RS03675 transcriptional regulator LeuO 0.84 EX31_RS00870 ABC transporter permease low > 89
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_12575 transcriptional regulator LeuO 0.20 CSW01_08340 ABC transporter permease low > 62
Variovorax sp. OAS795 0.22 ABID97_RS26910 LysR family transcriptional regulator 0.35 ABID97_RS10415 ABC transporter permease
Shewanella oneidensis MR-1 0.20 SO1607 transcriptional regulator, LysR family (NCBI ptt file) 0.20 SO1707 ABC transporter, permease protein, putative (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.20 HP15_1665 transcriptional regulator, LysR family 0.20 HP15_1351 ABC-type multidrug transport system, permease component low > 73
Ralstonia solanacearum PSI07 0.20 RPSI07_RS14540 LysR family transcriptional regulator 0.22 RPSI07_RS23145 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.20 RS_RS10140 LysR family transcriptional regulator 0.23 RS_RS00815 ABC transporter permease low > 80
Pseudomonas sp. S08-1 0.20 OH686_00880 Transcriptional regulator, LysR family 0.23 OH686_05810 Domain of unknown function / Efflux ABC transporter, permease protein low > 80
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS30005 LysR family transcriptional regulator 0.22 RR42_RS02285 mannose-1-phosphate guanyltransferase low > 128
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS14695 LysR family transcriptional regulator 0.22 ABZR87_RS05685 ABC transporter permease low > 80
Ralstonia solanacearum UW163 0.19 UW163_RS10955 LysR family transcriptional regulator 0.23 UW163_RS03380 ABC transporter permease
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS02770 LysR family transcriptional regulator 0.23 RALBFv3_RS10200 ABC transporter permease low > 76
Sinorhizobium meliloti 1021 0.19 SMa0307 LysR family transcriptional regulator 0.45 SM_b21205 ABC transporter permease low > 103
Shewanella loihica PV-4 0.19 Shew_2857 LysR family transcriptional regulator (RefSeq) 0.21 Shew_0425 ABC-2 type transporter (RefSeq) 0.32 7
Azospirillum sp. SherDot2 0.18 MPMX19_03531 PCP degradation transcriptional activation protein 0.21 MPMX19_01922 putative multidrug ABC transporter permease YbhS low > 112
Shewanella amazonensis SB2B 0.17 Sama_2520 putative transcriptional regulator (RefSeq) 0.20 Sama_3587 ABC transporter, permease protein, putative (RefSeq) low > 62
Azospirillum brasilense Sp245 0.17 AZOBR_RS27530 LysR family transcriptional regulator 0.21 AZOBR_RS05700 mannose-1-phosphate guanyltransferase low > 97
Dickeya dadantii 3937 0.15 DDA3937_RS21355 LysR family transcriptional regulator 0.70 DDA3937_RS08630 ABC transporter permease low > 74
Castellaniella sp019104865 MT123 0.14 ABCV34_RS11570 LysR family transcriptional regulator 0.43 ABCV34_RS01295 ABC transporter permease low > 48
Pectobacterium carotovorum WPP14 0.13 HER17_RS04190 LysR family transcriptional regulator 0.78 HER17_RS13370 ABC transporter permease low > 75
Rhodopseudomonas palustris CGA009 0.12 TX73_009285 LysR family transcriptional regulator 0.23 TX73_019610 ABC transporter permease low > 86
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS07360 LysR family transcriptional regulator 0.23 ABZR86_RS09900 ABC transporter permease low > 74

Not shown: 31 genomes with orthologs for ECD_00078 only; 13 genomes with orthologs for ECD_00760 only