Conservation of cofitness between DZA65_RS20275 and DZA65_RS19200 in Dickeya dianthicola ME23

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS20275 homoserine O-succinyltransferase 1.0 DZA65_RS19200 2-isopropylmalate synthase 0.92 14
Dickeya dianthicola 67-19 1.00 HGI48_RS19155 homoserine O-succinyltransferase 1.00 HGI48_RS18055 2-isopropylmalate synthase 0.85 27
Dickeya dadantii 3937 0.98 DDA3937_RS19065 homoserine O-succinyltransferase 0.99 DDA3937_RS18115 2-isopropylmalate synthase 0.78 53
Pectobacterium carotovorum WPP14 0.91 HER17_RS02285 homoserine O-succinyltransferase 0.90 HER17_RS03085 2-isopropylmalate synthase 0.98 3
Serratia liquefaciens MT49 0.90 IAI46_23200 homoserine O-succinyltransferase 0.84 IAI46_03355 2-isopropylmalate synthase low > 86
Rahnella sp. WP5 0.87 EX31_RS11735 homoserine O-succinyltransferase 0.81 EX31_RS03680 2-isopropylmalate synthase 0.96 35
Erwinia tracheiphila SCR3 0.84 LU632_RS22410 metA homoserine O-succinyltransferase 0.83 LU632_RS02880 leuA 2-isopropylmalate synthase 0.86 20
Escherichia fergusonii Becca 0.83 EFB2_04597 Homoserine O-succinyltransferase 0.85 EFB2_03971 2-isopropylmalate synthase low > 86
Escherichia coli Nissle 1917 0.83 ECOLIN_RS25515 homoserine O-succinyltransferase 0.85 ECOLIN_RS00400 2-isopropylmalate synthase — —
Escherichia coli ECRC62 0.83 BNILDI_06100 metA homoserine O-succinyltransferase 0.85 BNILDI_08550 2-isopropylmalate synthase 0.95 16
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04037 Homoserine O-succinyltransferase 0.85 OHPLBJKB_03583 2-isopropylmalate synthase low > 73
Escherichia coli ECOR27 0.83 NOLOHH_05420 metA homoserine O-succinyltransferase 0.85 NOLOHH_03060 2-isopropylmalate synthase 0.94 19
Escherichia coli ECRC100 0.83 OKFHMN_13275 metA homoserine O-succinyltransferase 0.85 OKFHMN_10715 2-isopropylmalate synthase 0.96 17
Escherichia coli BW25113 0.83 b4013 metA homoserine O-succinyltransferase (NCBI) 0.85 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.87 11
Escherichia coli ECRC102 0.83 NIAGMN_11025 metA homoserine O-succinyltransferase 0.85 NIAGMN_08565 2-isopropylmalate synthase — —
Escherichia coli ECRC98 0.83 JDDGAC_16900 metA homoserine O-succinyltransferase 0.85 JDDGAC_14310 2-isopropylmalate synthase 0.97 5
Escherichia coli ECOR38 0.83 HEPCGN_11915 metA homoserine O-succinyltransferase 0.85 HEPCGN_08695 2-isopropylmalate synthase 0.97 13
Escherichia coli ECRC99 0.83 KEDOAH_14885 metA homoserine O-succinyltransferase 0.85 KEDOAH_17440 2-isopropylmalate synthase — —
Escherichia coli ECRC101 0.83 MCAODC_03775 metA homoserine O-succinyltransferase 0.85 MCAODC_01230 2-isopropylmalate synthase 0.97 5
Escherichia coli BL21 0.83 ECD_03885 homoserine O-transsuccinylase 0.85 ECD_00076 2-isopropylmalate synthase 0.73 18
Pantoea sp. MT58 0.83 IAI47_18015 homoserine O-succinyltransferase 0.81 IAI47_16000 2-isopropylmalate synthase 0.97 10
Klebsiella michiganensis M5al 0.83 BWI76_RS01655 homoserine O-succinyltransferase 0.86 BWI76_RS04680 2-isopropylmalate synthase 0.93 8
Enterobacter sp. TBS_079 0.83 MPMX20_00230 Homoserine O-succinyltransferase 0.85 MPMX20_00769 2-isopropylmalate synthase 0.93 12
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.85 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.94 6
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_08100 homoserine O-succinyltransferase 0.70 CSW01_12595 2-isopropylmalate synthase low > 62
Shewanella amazonensis SB2B 0.58 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.67 Sama_0335 2-isopropylmalate synthase (RefSeq) 0.97 14
Shewanella loihica PV-4 0.58 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.66 Shew_3472 2-isopropylmalate synthase (RefSeq) 0.93 10
Shewanella oneidensis MR-1 0.58 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.65 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.97 8
Shewanella sp. ANA-3 0.58 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.66 Shewana3_3761 2-isopropylmalate synthase (RefSeq) 0.96 3
Alteromonas macleodii MIT1002 0.56 MIT1002_01112 Homoserine O-succinyltransferase 0.60 MIT1002_00949 2-isopropylmalate synthase 0.97 9
Bacteroides stercoris CC31F 0.53 HMPREF1181_RS00105 homoserine O-succinyltransferase 0.43 HMPREF1181_RS14150 2-isopropylmalate synthase low > 56
Bacteroides ovatus ATCC 8483 0.52 BACOVA_03007 homoserine O-succinyltransferase 0.43 BACOVA_04604 2-isopropylmalate synthase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.51 BT2413 homoserine O-succinyltransferase (NCBI ptt file) 0.43 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) low > 81
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS14680 homoserine O-succinyltransferase 0.45 HMPREF1058_RS14545 2-isopropylmalate synthase low > 67
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS10360 homoserine O-succinyltransferase 0.44 ABI39_RS10195 2-isopropylmalate synthase low > 72
Parabacteroides merdae CL09T00C40 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase 0.44 HMPREF1078_RS16665 2-isopropylmalate synthase low > 61
Synechococcus elongatus PCC 7942 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase 0.42 Synpcc7942_1410 leuA 2-isopropylmalate synthase — —
Agrobacterium fabrum C58 0.43 Atu2718 homoserine O-succinyltransferase 0.10 Atu2264 2-isopropylmalate synthase 0.97 2
Phaeobacter inhibens DSM 17395 0.43 PGA1_c14560 homoserine O-succinyltransferase MetA 0.40 PGA1_c26470 2-isopropylmalate synthase LeuA 0.76 14
Rhizobium sp. OAE497 0.42 ABIE40_RS18590 homoserine O-succinyltransferase 0.16 ABIE40_RS06220 citramalate synthase low > 107
Sinorhizobium meliloti 1021 0.42 SMc03797 homoserine O-succinyltransferase 0.16 SMc02546 alpha-isopropylmalate/homocitrate synthase family transferase low > 103
Bifidobacterium breve UCC2003 0.40 BBR_RS11990 homoserine O-succinyltransferase 0.10 BBR_RS11170 2-isopropylmalate synthase low > 34
Dinoroseobacter shibae DFL-12 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) 0.39 Dshi_0596 2-isopropylmalate synthase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS42530 homoserine O-succinyltransferase 0.42 QEN71_RS24195 2-isopropylmalate synthase low > 153

Not shown: 2 genomes with orthologs for DZA65_RS20275 only; 46 genomes with orthologs for DZA65_RS19200 only