Conservation of cofitness between DZA65_RS20275 and DZA65_RS10055 in Dickeya dianthicola ME23

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS20275 homoserine O-succinyltransferase 1.0 DZA65_RS10055 histidinol dehydrogenase 0.87 20
Dickeya dianthicola 67-19 1.00 HGI48_RS19155 homoserine O-succinyltransferase 0.99 HGI48_RS09745 histidinol dehydrogenase low > 71
Dickeya dadantii 3937 0.98 DDA3937_RS19065 homoserine O-succinyltransferase 0.95 DDA3937_RS09735 histidinol dehydrogenase 0.94 11
Pectobacterium carotovorum WPP14 0.91 HER17_RS02285 homoserine O-succinyltransferase 0.83 HER17_RS12230 histidinol dehydrogenase 0.97 13
Serratia liquefaciens MT49 0.90 IAI46_23200 homoserine O-succinyltransferase 0.79 IAI46_08210 histidinol dehydrogenase low > 86
Rahnella sp. WP5 0.87 EX31_RS11735 homoserine O-succinyltransferase 0.82 EX31_RS11440 histidinol dehydrogenase 0.97 28
Erwinia tracheiphila SCR3 0.84 LU632_RS22410 metA homoserine O-succinyltransferase 0.75 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Escherichia coli Nissle 1917 0.83 ECOLIN_RS25515 homoserine O-succinyltransferase 0.81 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia fergusonii Becca 0.83 EFB2_04597 Homoserine O-succinyltransferase 0.80 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli ECOR27 0.83 NOLOHH_05420 metA homoserine O-succinyltransferase 0.80 NOLOHH_15830 hisD Histidinol dehydrogenase 0.94 21
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04037 Homoserine O-succinyltransferase 0.79 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia coli ECRC62 0.83 BNILDI_06100 metA homoserine O-succinyltransferase 0.80 BNILDI_14740 hisD Histidinol dehydrogenase 0.96 10
Escherichia coli BW25113 0.83 b4013 metA homoserine O-succinyltransferase (NCBI) 0.80 b2020 hisD histidinol dehydrogenase (NCBI) 0.84 26
Escherichia coli ECOR38 0.83 HEPCGN_11915 metA homoserine O-succinyltransferase 0.80 HEPCGN_03220 hisD Histidinol dehydrogenase 0.97 20
Escherichia coli ECRC98 0.83 JDDGAC_16900 metA homoserine O-succinyltransferase 0.80 JDDGAC_28625 hisD Histidinol dehydrogenase 0.94 15
Escherichia coli ECRC102 0.83 NIAGMN_11025 metA homoserine O-succinyltransferase 0.80 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC99 0.83 KEDOAH_14885 metA homoserine O-succinyltransferase 0.80 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC100 0.83 OKFHMN_13275 metA homoserine O-succinyltransferase 0.80 OKFHMN_24515 hisD Histidinol dehydrogenase 0.82 77
Escherichia coli ECRC101 0.83 MCAODC_03775 metA homoserine O-succinyltransferase 0.80 MCAODC_20425 hisD Histidinol dehydrogenase 0.93 17
Pantoea sp. MT58 0.83 IAI47_18015 homoserine O-succinyltransferase 0.77 IAI47_07090 histidinol dehydrogenase 0.96 20
Escherichia coli BL21 0.83 ECD_03885 homoserine O-transsuccinylase 0.80 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 0.74 14
Enterobacter sp. TBS_079 0.83 MPMX20_00230 Homoserine O-succinyltransferase 0.78 MPMX20_03002 Histidinol dehydrogenase 0.93 13
Klebsiella michiganensis M5al 0.83 BWI76_RS01655 homoserine O-succinyltransferase 0.79 BWI76_RS18925 histidinol dehydrogenase 0.86 34
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.79 EX28DRAFT_0539 histidinol dehydrogenase 0.90 11
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) 0.79 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_08100 homoserine O-succinyltransferase 0.64 CSW01_05750 histidinol dehydrogenase low > 62
Shewanella amazonensis SB2B 0.58 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.56 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.96 21
Shewanella loihica PV-4 0.58 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.56 Shew_2198 histidinol dehydrogenase (RefSeq) 0.92 23
Shewanella oneidensis MR-1 0.58 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.53 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.96 13
Shewanella sp. ANA-3 0.58 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.54 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.94 11
Alteromonas macleodii MIT1002 0.56 MIT1002_01112 Homoserine O-succinyltransferase 0.54 MIT1002_02633 Histidinol dehydrogenase 0.96 34
Bacteroides stercoris CC31F 0.53 HMPREF1181_RS00105 homoserine O-succinyltransferase 0.50 HMPREF1181_RS04860 histidinol dehydrogenase low > 56
Bacteroides ovatus ATCC 8483 0.52 BACOVA_03007 homoserine O-succinyltransferase 0.50 BACOVA_01234 histidinol dehydrogenase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.51 BT2413 homoserine O-succinyltransferase (NCBI ptt file) 0.49 BT0201 histidinol dehydrogenase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS14680 homoserine O-succinyltransferase 0.50 HMPREF1058_RS15875 histidinol dehydrogenase low > 67
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS10360 homoserine O-succinyltransferase 0.50 ABI39_RS11835 histidinol dehydrogenase low > 72
Parabacteroides merdae CL09T00C40 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase 0.46 HMPREF1078_RS02450 histidinol dehydrogenase low > 61
Synechococcus elongatus PCC 7942 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase 0.32 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Agrobacterium fabrum C58 0.43 Atu2718 homoserine O-succinyltransferase 0.33 Atu0537 histidinol dehydrogenase 0.90 17
Phaeobacter inhibens DSM 17395 0.43 PGA1_c14560 homoserine O-succinyltransferase MetA 0.33 PGA1_c31190 histidinol dehydrogenase HisD — —
Rhizobium sp. OAE497 0.42 ABIE40_RS18590 homoserine O-succinyltransferase 0.34 ABIE40_RS02725 histidinol dehydrogenase 0.94 19
Sinorhizobium meliloti 1021 0.42 SMc03797 homoserine O-succinyltransferase 0.34 SMc02307 histidinol dehydrogenase 0.88 53
Bifidobacterium breve UCC2003 0.40 BBR_RS11990 homoserine O-succinyltransferase 0.28 BBR_RS17055 histidinol dehydrogenase low > 34
Dinoroseobacter shibae DFL-12 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) 0.32 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS42530 homoserine O-succinyltransferase 0.30 QEN71_RS27865 histidinol dehydrogenase low > 153

Not shown: 1 genomes with orthologs for DZA65_RS20275 only; 57 genomes with orthologs for DZA65_RS10055 only