Conservation of cofitness between CSW01_19050 and CSW01_18635 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19050 phosphoenolpyruvate synthase 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.70 5
Serratia liquefaciens MT49 0.72 IAI46_11115 phosphoenolpyruvate synthase 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase low > 87
Rahnella sp. WP5 0.72 EX31_RS13935 phosphoenolpyruvate synthase 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.51 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 78
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76
Dickeya dianthicola 67-19 0.71 HGI48_RS12875 phosphoenolpyruvate synthase 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.57 52
Dickeya dianthicola ME23 0.71 DZA65_RS13340 phosphoenolpyruvate synthase 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS17685 phosphoenolpyruvate synthase 0.50 PagCFBP13505_RS01160 NADP-dependent phosphogluconate dehydrogenase
Pantoea sp. MT58 0.71 IAI47_10905 phosphoenolpyruvate synthase 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase
Pectobacterium carotovorum WPP14 0.71 HER17_RS08885 phosphoenolpyruvate synthase 0.52 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase low > 75
Shewanella amazonensis SB2B 0.71 Sama_2072 phosphoenolpyruvate synthase (RefSeq) 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) low > 62
Dickeya dadantii 3937 0.71 DDA3937_RS12805 phosphoenolpyruvate synthase 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Klebsiella michiganensis M5al 0.71 BWI76_RS17065 phosphoenolpyruvate synthase 0.52 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Enterobacter sp. TBS_079 0.70 MPMX20_01922 Phosphoenolpyruvate synthase 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating low > 85
Erwinia amylovora T8 0.70 OLJFJH_14620 phosphoenolpyruvate synthase 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECOR38 0.70 HEPCGN_05510 ppsA phosphoenolpyruvate synthase 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 88
Escherichia fergusonii Becca 0.70 EFB2_02289 Phosphoenolpyruvate synthase 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating low > 86
Escherichia coli ECRC98 0.70 JDDGAC_01720 ppsA phosphoenolpyruvate synthase 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli ECRC62 0.70 BNILDI_16455 ppsA phosphoenolpyruvate synthase 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli BW25113 0.70 b1702 pps phosphoenolpyruvate synthase (NCBI) 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC101 0.70 MCAODC_18265 ppsA phosphoenolpyruvate synthase 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli ECRC99 0.70 KEDOAH_00965 ppsA phosphoenolpyruvate synthase 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC100 0.70 OKFHMN_27145 ppsA phosphoenolpyruvate synthase 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase low > 79
Escherichia coli ECOR27 0.70 NOLOHH_17665 ppsA phosphoenolpyruvate synthase 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 76
Escherichia coli ECRC102 0.70 NIAGMN_00920 ppsA phosphoenolpyruvate synthase 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase low > 80
Escherichia coli Nissle 1917 0.70 ECOLIN_RS09510 phosphoenolpyruvate synthase 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase
Escherichia coli BL21 0.70 ECD_01671 phosphoenolpyruvate synthase 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating low > 61
Klebsiella pneumoniae MKP103 0.70 KDGMDA_24285 phosphoenolpyruvate synthase 0.52 KDGMDA_26195 NADP-dependent phosphogluconate dehydrogenase low > 95
Alteromonas macleodii MIT1002 0.70 MIT1002_01816 Phosphoenolpyruvate synthase 0.42 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating low > 70
Erwinia tracheiphila SCR3 0.70 LU632_RS11025 ppsA phosphoenolpyruvate synthase 0.50 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase low > 73
Shewanella sp. ANA-3 0.70 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) 0.42 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) low > 73
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_25335 ppsA phosphoenolpyruvate synthase 0.50 IJEDHG_19020 gndA NADP-dependent phosphogluconate dehydrogenase
Shewanella oneidensis MR-1 0.70 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) 0.40 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_1549 phosphoenolpyruvate synthase (RefSeq) 0.42 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq)
Variovorax sp. SCN45 0.62 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.51 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 127
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS06505 phosphoenolpyruvate synthase 0.53 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.62 ABIE53_002485 pyruvate,water dikinase 0.51 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS07250 phosphoenolpyruvate synthase 0.52 ABZR86_RS13330 NADP-dependent phosphogluconate dehydrogenase low > 74
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS12055 phosphoenolpyruvate synthase 0.50 BPHYT_RS29625 6-phosphogluconate dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_00627 phosphoenolpyruvate synthase 0.52 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) low > 103
Variovorax sp. OAS795 0.62 ABID97_RS10815 phosphoenolpyruvate synthase 0.51 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 91
Methylophilus sp. DMC18 0.62 GFF675 Phosphoenolpyruvate synthase 0.48 GFF2795 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating
Synechocystis sp000284455 PCC 6803 0.54 SGL_RS15890 pyruvate, water dikinase 0.48 SGL_RS12985 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 52
Synechococcus elongatus PCC 7942 0.54 Synpcc7942_0781 ppsA phosphoenolpyruvate synthase 0.48 Synpcc7942_0039 gnd 6-phosphogluconate dehydrogenase low > 38
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS11705 phosphoenolpyruvate synthase 0.44 ABZR88_RS02970 NADP-dependent phosphogluconate dehydrogenase
Sinorhizobium meliloti 1021 0.07 SMc00025 pyruvate phosphate dikinase 0.41 SMc04262 6-phosphogluconate dehydrogenase low > 103

Not shown: 45 genomes with orthologs for CSW01_19050 only; 15 genomes with orthologs for CSW01_18635 only