Conservation of cofitness between CSW01_07230 and CSW01_16925 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07230 cytochrome-c oxidase, cbb3-type subunit I 1.0 CSW01_16925 cytochrome b 0.44 12
Shewanella amazonensis SB2B 0.88 Sama_1791 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) 0.36 Sama_0949 cytochrome b561 (RefSeq) low > 62
Shewanella sp. ANA-3 0.87 Shewana3_2107 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) 0.55 Shewana3_1178 cytochrome B561 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.87 SO2364 ccoN cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) 0.49 SO3371 hypothetical Cytochrome B561 (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.86 Shew_1985 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) 0.47 Shew_1120 cytochrome B561 (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.82 MIT1002_02129 hypothetical protein 0.56 MIT1002_03883 hypothetical protein low > 70
Pseudomonas aeruginosa PA14 0.80 IKLFDK_07450 cytochrome-c oxidase cbb3-type subunit I 0.46 IKLFDK_23310 cytochrome b low > 98
Pseudomonas aeruginosa MRSN321 0.80 DY961_RS19425 ccoN;go_function=cytochrome-c cytochrome-c oxidase cbb3-type subunit I 0.46 DY961_RS22095 cytochrome b/b6 domain-containing protein 0.36 15
Pseudomonas aeruginosa PUPa3 0.80 DQ20_RS53550 ccoN;go_function=cytochrome-c cytochrome-c oxidase cbb3-type subunit I 0.46 DQ20_RS37210 cytochrome b/b6 domain-containing protein low > 101
Pseudomonas putida KT2440 0.80 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.46 PP_4982 putative cytochrome b561, iron-regulated low > 96
Pseudomonas sp. BP01 0.80 JOY50_RS00055 ccoN cytochrome-c oxidase, cbb3-type subunit I 0.46 JOY50_RS09785 cytochrome b low > 84
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_4056 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) 0.41 PfGW456L13_1046 Cytochrome B561 low > 87
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS22320 cytochrome-c oxidase, cbb3-type subunit I 0.45 PFLU_RS28190 cytochrome b low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS22320 cytochrome-c oxidase, cbb3-type subunit I 0.45 PFLU_RS28190 cytochrome b low > 109
Pseudomonas simiae WCS417 0.79 PS417_20700 cbb3-type cytochrome c oxidase subunit I 0.45 PS417_26535 cytochrome B561 low > 88
Pseudomonas sp. DMC3 0.79 GFF729 Cbb3-type cytochrome c oxidase subunit CcoN1 0.45 GFF176 Cytochrome b561 low > 89
Pseudomonas orientalis W4I3 0.79 QF045_RS22515 cytochrome-c oxidase, cbb3-type subunit I 0.45 QF045_RS00930 cytochrome b low > 93
Pseudomonas sp. SVBP6 0.79 COO64_RS18710 ccoN cytochrome-c oxidase, cbb3-type subunit I 0.43 COO64_RS17460 cytochrome b low > 93
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3884 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) 0.45 Pf1N1B4_2380 Cytochrome B561 low > 87
Pseudomonas lactucae CFBP13502 0.79 GEMAOFIL_04285 Cbb3-type cytochrome c oxidase subunit CcoN1 0.46 GEMAOFIL_05438 Cytochrome b561 low > 96
Pseudomonas sp. S08-1 0.78 OH686_02175 cytochrome c oxidase, cbb3-type, subunit I 0.50 OH686_10845 Cytochrome b561-related 2 low > 80
Pseudomonas sp. RS175 0.78 PFR28_01095 Cbb3-type cytochrome c oxidase subunit CcoN1 0.48 PFR28_04206 Cytochrome b561 low > 88
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_2305 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) 0.48 Pf6N2E2_4633 Cytochrome B561 low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_02405 cytochrome C oxidase Cbb3 0.49 AO356_13580 cytochrome B low > 104
Marinobacter adhaerens HP15 0.78 HP15_2107 cytochrome c oxidase, cbb3-type, subunit I 0.49 HP15_2524 inner membrane protein — —
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_00585 cytochrome C oxidase Cbb3 0.45 AO353_08040 cytochrome B low > 101
Pseudomonas stutzeri RCH2 0.78 Psest_2527 cytochrome c oxidase, cbb3-type, subunit I 0.48 Psest_0307 Cytochrome B561 low > 67
Kangiella aquimarina DSM 16071 0.77 B158DRAFT_1966 cytochrome c oxidase, cbb3-type, subunit I 0.24 B158DRAFT_0324 Cytochrome B561 low > 40
Pseudomonas segetis P6 0.77 MPMX49_02314 Cbb3-type cytochrome c oxidase subunit CcoN1 0.46 MPMX49_00642 Cytochrome b561 — —
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_3413 Cytochrome c oxidase cbb3-type, subunit I 0.42 Psyr_0456 Cytochrome B561, bacterial — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_3413 Cytochrome c oxidase cbb3-type, subunit I 0.42 Psyr_0456 Cytochrome B561, bacterial — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS06870 cytochrome-c oxidase, cbb3-type subunit I 0.20 ABCV34_RS06055 cytochrome b low > 48
Variovorax sp. SCN45 0.71 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) 0.17 GFF695 Cytochrome B561 low > 127
Azospirillum brasilense Sp245 0.62 AZOBR_RS01180 peptidase S41 0.16 AZOBR_RS21975 hypothetical protein low > 97
Rhodospirillum rubrum S1H 0.62 Rru_A3332 Cytochrome c oxidase cbb3-type, subunit I (NCBI) 0.30 Rru_A3682 Cytochrome B561 (NCBI) — —
Bosea sp. OAE506 0.62 ABIE41_RS10565 cytochrome-c oxidase, cbb3-type subunit I 0.15 ABIE41_RS11040 cytochrome b/b6 domain-containing protein low > 77
Xanthobacter sp. DMC5 0.61 GFF4622 Cytochrome c oxidase subunit 1 , bacteroid 0.21 GFF3925 Cytochrome b561 — —
Agrobacterium fabrum C58 0.60 Atu1537 cytochrome-c oxidase, FixN chain 0.20 Atu1483 cytochrome b561 low > 89
Sphingobium sp. HT1-2 0.58 GFF4337 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) 0.21 GFF961 Cytochrome b561 low > 95

Not shown: 28 genomes with orthologs for CSW01_07230 only; 29 genomes with orthologs for CSW01_16925 only