Conservation of cofitness between CSW01_14565 and CSW01_13580 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14565 type VI secretion system baseplate subunit TssF 1.0 CSW01_13580 cation-efflux pump FieF 0.46 9
Dickeya dadantii 3937 0.53 DDA3937_RS07030 type VI secretion system baseplate subunit TssF 0.58 DDA3937_RS00840 CDF family cation-efflux transporter FieF low > 74
Dickeya dianthicola ME23 0.53 DZA65_RS08555 type VI secretion system baseplate subunit TssF 0.57 DZA65_RS21580 CDF family cation-efflux transporter FieF low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS07960 type VI secretion system baseplate subunit TssF 0.57 HGI48_RS20535 CDF family cation-efflux transporter FieF low > 71
Pectobacterium carotovorum WPP14 0.52 HER17_RS04855 type VI secretion system baseplate subunit TssF 0.61 HER17_RS00720 CDF family cation-efflux transporter FieF low > 75
Pseudomonas putida KT2440 0.48 PP_2621 conserved protein of unknown function 0.41 PP_4774 divalent cation efflux transporter low > 96
Erwinia tracheiphila SCR3 0.46 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF 0.55 LU632_RS21845 fieF CDF family cation-efflux transporter FieF low > 73
Escherichia coli ECOR27 0.42 NOLOHH_02230 tssF Type VI secretion system protein TssF 0.57 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF low > 76
Escherichia coli ECRC98 0.42 JDDGAC_13470 tssF Type VI secretion system protein TssF 0.57 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF low > 87
Escherichia coli ECRC102 0.42 NIAGMN_07720 tssF Type VI secretion system protein TssF 0.57 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03430 hypothetical protein 0.57 OHPLBJKB_04136 Ferrous-iron efflux pump FieF low > 74
Escherichia coli ECRC101 0.42 MCAODC_00390 tssF Type VI secretion system protein TssF 0.57 MCAODC_04335 fieF CDF family cation-efflux transporter FieF low > 87
Escherichia coli ECRC99 0.42 KEDOAH_18280 tssF Type VI secretion system protein TssF 0.57 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF — —
Escherichia coli ECRC100 0.41 OKFHMN_09870 tssF Type VI secretion system protein TssF 0.57 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF 0.53 78
Pseudomonas segetis P6 0.39 MPMX49_00135 hypothetical protein 0.43 MPMX49_01088 Ferrous-iron efflux pump FieF low > 75
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2086 Protein ImpG/VasA 0.42 Pf1N1B4_2726 Cobalt-zinc-cadmium resistance protein low > 87
Pseudomonas sp. DMC3 0.37 GFF454 hypothetical protein 0.42 GFF3913 Ferrous-iron efflux pump FieF low > 89
Pseudomonas sp. S08-1 0.36 OH686_12825 T6SS component TssF (ImpG/VasA) 0.42 OH686_08810 Ferrous-iron efflux pump FieF low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_09425 type VI secretion protein 0.41 AO353_06310 ferrous iron transporter low > 101
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS19965 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.43 DY961_RS13040 fieF;inference=COORDINATES CDF family cation-efflux transporter FieF low > 100
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS54060 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.43 DQ20_RS48365 fieF;inference=COORDINATES CDF family cation-efflux transporter FieF low > 101
Pseudomonas aeruginosa PA14 0.36 IKLFDK_07995 Protein ImpG/VasA 0.43 IKLFDK_20440 CDF family cation-efflux transporter FieF low > 98
Pseudomonas simiae WCS417 0.36 PS417_15310 type VI secretion protein 0.42 PS417_24560 ferrous iron transporter low > 88
Pseudomonas stutzeri RCH2 0.36 Psest_0127 type VI secretion protein, VC_A0110 family 0.40 Psest_0573 cation diffusion facilitator family transporter low > 67
Pseudomonas orientalis W4I3 0.36 QF045_RS14215 type VI secretion system baseplate subunit TssF 0.40 QF045_RS26845 cation diffusion facilitator family transporter low > 93
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_12145 type VI secretion protein 0.41 AO356_15475 ferrous iron transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4301 Protein ImpG/VasA 0.41 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein low > 103
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4956 protein of unknown function DUF879 0.45 Psyr_4333 Cation efflux protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4956 protein of unknown function DUF879 0.45 Psyr_4333 Cation efflux protein low > 86
Variovorax sp. OAS795 0.25 ABID97_RS12940 type VI secretion system baseplate subunit TssF 0.14 ABID97_RS24945 cation diffusion facilitator family transporter low > 91
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS22110 type VI secretion protein ImpG 0.17 RR42_RS30535 cobalt transporter low > 128
Pseudomonas sp. BP01 0.25 JOY50_RS19900 tssF type VI secretion system baseplate subunit TssF 0.38 JOY50_RS21785 cation diffusion facilitator family transporter low > 84
Klebsiella pneumoniae MKP103 0.24 KDGMDA_24740 type VI secretion system baseplate subunit TssF 0.59 KDGMDA_09240 CDF family cation-efflux transporter FieF low > 95
Escherichia coli Nissle 1917 0.23 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF 0.57 ECOLIN_RS22550 CDF family cation-efflux transporter FieF low > 55
Enterobacter sp. TBS_079 0.23 MPMX20_01644 hypothetical protein 0.60 MPMX20_04553 Ferrous-iron efflux pump FieF low > 85
Rahnella sp. WP5 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF 0.33 EX31_RS10790 cation diffusion facilitator family transporter low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family 0.59 EX28DRAFT_4389 cation diffusion facilitator family transporter low > 76
Erwinia amylovora T8 0.22 OLJFJH_03085 type VI secretion system baseplate subunit TssF 0.56 OLJFJH_05950 CDF family cation-efflux transporter FieF low > 58
Pantoea sp. MT58 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF 0.58 IAI47_00775 CDF family cation-efflux transporter FieF low > 76
Azospirillum sp. SherDot2 0.21 MPMX19_03419 hypothetical protein 0.41 MPMX19_00714 Ferrous-iron efflux pump FieF low > 112
Azospirillum brasilense Sp245 0.20 AZOBR_RS21230 hypothetical protein 0.11 AZOBR_RS26670 zinc transporter ZitB low > 97
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS20160 type VI secretion protein 0.14 HSERO_RS02620 cobalt transporter low > 78
Variovorax sp. SCN45 0.20 GFF6367 T6SS component TssF (ImpG/VasA) 0.17 GFF2069 Cobalt-zinc-cadmium resistance protein low > 127
Pseudomonas sp. RS175 0.19 PFR28_02388 hypothetical protein 0.41 PFR28_03835 Ferrous-iron efflux pump FieF low > 88
Pseudomonas sp. SVBP6 0.19 COO64_RS00470 tssF type VI secretion system baseplate subunit TssF 0.42 COO64_RS15445 cation diffusion facilitator family transporter low > 93
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_00062 hypothetical protein 0.42 GEMAOFIL_05060 Ferrous-iron efflux pump FieF low > 96
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.42 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Agrobacterium fabrum C58 0.19 Atu4337 hypothetical protein 0.27 Atu2274 cation efflux system protein low > 89
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS19815 type VI secretion system baseplate subunit TssF 0.59 PagCFBP13505_RS18565 CDF family cation-efflux transporter FieF low > 74
Pseudomonas fluorescens SBW25 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.42 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_04995 tssF type VI secretion system baseplate subunit TssF 0.53 IJEDHG_12855 fieF CDF family cation-efflux transporter FieF low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4050 Protein ImpG/VasA 0.58 GFF2282 Cobalt-zinc-cadmium resistance protein low > 78
Serratia liquefaciens MT49 0.16 IAI46_05550 type VI secretion system baseplate subunit TssF 0.59 IAI46_24650 CDF family cation-efflux transporter FieF low > 87

Not shown: 13 genomes with orthologs for CSW01_14565 only; 41 genomes with orthologs for CSW01_13580 only