Conservation of cofitness between CSW01_07190 and CSW01_11935 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07190 transcriptional regulator FNR 1.0 CSW01_11935 sodium:alanine symporter family protein 0.61 20
Rahnella sp. WP5 0.86 EX31_RS07200 FNR family transcription factor 0.49 EX31_RS03925 alanine:cation symporter family protein low > 89
Serratia liquefaciens MT49 0.86 IAI46_13260 FNR family transcription factor 0.70 IAI46_03050 sodium:alanine symporter family protein low > 86
Escherichia fergusonii Becca 0.85 EFB2_02593 Fumarate and nitrate reduction regulatory protein 0.50 EFB2_04036 Amino-acid carrier protein AlsT low > 86
Escherichia coli ECOR38 0.85 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ low > 88
Escherichia coli ECRC102 0.85 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ low > 80
Escherichia coli ECRC99 0.85 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli ECRC98 0.85 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ low > 87
Escherichia coli ECOR27 0.85 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ low > 76
Escherichia coli ECRC100 0.85 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein 0.50 OHPLBJKB_03653 Amino-acid carrier protein AlsT low > 74
Escherichia coli ECRC62 0.85 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ low > 75
Escherichia coli ECRC101 0.85 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.50 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ low > 88
Escherichia coli BW25113 0.85 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) 0.50 b0007 yaaJ predicted transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.85 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr 0.50 ECOLIN_RS00040 sodium:alanine symporter family protein low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF2656 Fumarate and nitrate reduction regulatory protein 0.55 GFF1082 Putative alanine/glycine transport protein low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS16185 transcriptional regulator FNR 0.51 BWI76_RS04265 sodium:alanine symporter family protein — —
Klebsiella pneumoniae MKP103 0.85 KDGMDA_21005 fumarate/nitrate reduction transcriptional regulator Fnr 0.48 KDGMDA_12535 sodium:alanine symporter family protein low > 95
Enterobacter sp. TBS_079 0.85 MPMX20_02035 Fumarate and nitrate reduction regulatory protein 0.53 MPMX20_00715 Amino-acid carrier protein AlsT low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_1540 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.55 EX28DRAFT_3619 amino acid carrier protein low > 76
Shewanella sp. ANA-3 0.77 Shewana3_2115 fumarate/nitrate reduction transcriptional regulator (RefSeq) 0.63 Shewana3_3144 amino acid carrier protein (RefSeq) — —
Shewanella oneidensis MR-1 0.76 SO2356 etrA electron transport regulator a (NCBI ptt file) 0.63 SO3541 sodium:alanine symporter family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.76 Sama_1799 fumarate/nitrate reduction transcriptional regulator (RefSeq) 0.66 Sama_0916 sodium:alanine symporter family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.76 Shew_1993 fumarate/nitrate reduction transcriptional regulator (RefSeq) 0.57 Shew_1092 amino acid carrier protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.57 MIT1002_02137 Fumarate and nitrate reduction regulatory protein 0.50 MIT1002_01494 Amino-acid carrier protein AlsT low > 70
Pseudomonas segetis P6 0.54 MPMX49_02303 Transcriptional activator protein Anr 0.65 MPMX49_03447 Amino-acid carrier protein AlsT low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp 0.45 Psyr_5052 Sodium:alanine symporter — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp 0.45 Psyr_5052 Sodium:alanine symporter low > 86
Pseudomonas sp. DMC3 0.54 GFF711 Transcriptional activator protein Anr 0.44 GFF489 Amino-acid carrier protein AlsT — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4071 Fumarate and nitrate reduction regulatory protein 0.44 PfGW456L13_741 sodium/alanine transporter low > 87
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3867 Fumarate and nitrate reduction regulatory protein 0.45 Pf1N1B4_2024 sodium/alanine transporter — —
Pseudomonas sp. RS175 0.53 PFR28_01079 Transcriptional activator protein Anr 0.46 PFR28_04500 Amino-acid carrier protein AlsT — —
Pseudomonas simiae WCS417 0.53 PS417_20785 transcriptional regulator 0.45 PS417_28135 sodium:alanine symporter low > 88
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_04302 Transcriptional activator protein Anr 0.46 GEMAOFIL_00093 Amino-acid carrier protein AlsT — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS22395 fumarate/nitrate reduction transcriptional regulator Fnr 0.46 PFLU_RS29820 alanine:cation symporter family protein low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS22395 fumarate/nitrate reduction transcriptional regulator Fnr 0.46 PFLU_RS29820 alanine:cation symporter family protein low > 109
Pseudomonas aeruginosa PA14 0.53 IKLFDK_07375 transcriptional regulator Anr 0.67 IKLFDK_18590 sodium:alanine symporter family protein low > 100
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_00660 transcriptional regulator 0.45 AO353_09955 sodium:alanine symporter low > 101
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_2323 Fumarate and nitrate reduction regulatory protein 0.46 Pf6N2E2_4086 sodium/alanine transporter low > 103
Pseudomonas stutzeri RCH2 0.53 Psest_2538 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.48 Psest_4077 amino acid carrier protein low > 67
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_02485 transcriptional regulator 0.47 AO356_11095 sodium:alanine symporter low > 104
Pseudomonas sp. SVBP6 0.52 COO64_RS18640 fnrA Crp/Fnr family transcriptional regulator FnrA 0.45 COO64_RS01765 sodium:alanine symporter family protein low > 93
Pseudomonas putida KT2440 0.52 PP_4265 DNA-binding transcriptional dual regulator 0.45 PP_0496 Sodium/alanine symporter low > 96
Pseudomonas sp. BP01 0.52 JOY50_RS00125 fnrA Crp/Fnr family transcriptional regulator FnrA 0.45 JOY50_RS13690 sodium:alanine symporter family protein — —

Not shown: 49 genomes with orthologs for CSW01_07190 only; 10 genomes with orthologs for CSW01_11935 only