| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_11205 | | flagellar basal-body rod protein FlgF | 1.0 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | 0.95 | 1 |
| Shewanella loihica PV-4 | 0.60 | Shew_1349 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.58 | Shew_1364 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.96 | 17 |
| Shewanella amazonensis SB2B | 0.57 | Sama_2314 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.58 | Sama_2299 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.57 | SO3245 | flgF | flagellar basal-body rod protein FlgF (NCBI ptt file) | 0.58 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_1325 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.58 | Shewana3_1340 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01043 | | Putative proximal rod protein | 0.61 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | low | > 70 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_2964 | | flagellar basal-body rod protein FlgF | 0.50 | Psest_1767 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 67 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_1471 | | flagellar basal-body rod FlgF | 0.51 | HP15_2328 | | two component, sigma54 specific, transcriptional regulator, Fis family | 0.93 | 5 |
| Pseudomonas putida KT2440 | 0.47 | PP_4386 | | flagellar basal-body rod protein FlgF | 0.48 | PP_4371 | | two component system AtoC DNA-binding transcriptional activator | 0.64 | 36 |
| Pseudomonas sp. BP01 | 0.47 | JOY50_RS00770 | | flagellar basal body rod protein FlgF | 0.49 | JOY50_RS00695 | | sigma-54 dependent transcriptional regulator | low | > 84 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_3476 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | 0.48 | Psyr_3459 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_3476 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | 0.48 | Psyr_3459 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.47 | IKLFDK_04965 | | flagellar basal-body rod protein FlgF | 0.49 | IKLFDK_05055 | | sigma-54-dependent response regulator transcription factor FleR | 0.80 | 7 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_02955 | | Flagellar basal-body rod protein FlgF | 0.51 | OH686_02845 | | Flagellar two-component response regulator FleR | 0.68 | 15 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_4387 | | Flagellar basal-body rod protein FlgF | 0.49 | PfGW456L13_4355 | | Flagellar regulatory protein FleQ | 0.27 | 27 |
| Pseudomonas sp. SVBP6 | 0.46 | COO64_RS21375 | | flagellar basal body rod protein FlgF | 0.48 | COO64_RS21290 | | sigma-54 dependent transcriptional regulator | 0.54 | 84 |
| Pseudomonas lactucae CFBP13502 | 0.45 | GEMAOFIL_04176 | | Flagellar basal-body rod protein FlgF | 0.49 | GEMAOFIL_04161 | | Regulatory protein AtoC | low | > 93 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_19890 | | flagellar basal body rod protein FlgF | 0.49 | PS417_19815 | | Fis family transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.45 | PFR28_00804 | | Flagellar basal-body rod protein FlgF | 0.50 | PFR28_00830 | | Regulatory protein AtoC | 0.69 | 36 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS21860 | | flagellar basal body rod protein FlgF | 0.49 | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | 0.76 | 34 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS21860 | | flagellar basal body rod protein FlgF | 0.49 | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | 0.77 | 29 |
| Pseudomonas segetis P6 | 0.45 | MPMX49_03163 | | Flagellar basal-body rod protein FlgF | 0.51 | MPMX49_03148 | | Regulatory protein AtoC | 0.97 | 4 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_18595 | | flagellar biosynthesis protein FlgF | 0.50 | AO353_18670 | | Fis family transcriptional regulator | 0.74 | 15 |
| Pseudomonas sp. DMC3 | 0.45 | GFF2416 | | Flagellar basal-body rod protein FlgF | 0.50 | GFF2447 | | Regulatory protein AtoC | low | > 89 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_2628 | | Flagellar basal-body rod protein FlgF | 0.50 | Pf6N2E2_2595 | | Flagellar regulatory protein FleQ | 0.59 | 52 |
| Pseudomonas fluorescens FW300-N2C3 | 0.44 | AO356_03930 | | flagellar biosynthesis protein FlgF | 0.48 | AO356_03845 | | Fis family transcriptional regulator | 0.69 | 43 |
| Dechlorosoma suillum PS | 0.38 | Dsui_2520 | | flagellar basal-body rod protein FlgF | 0.45 | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 51 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_1855 | | flagellar hook-basal body protein | 0.30 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 76 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_01756 | | Flagellar basal-body rod protein FlgF | 0.30 | MPMX20_03423 | | Transcriptional regulatory protein QseF | low | > 85 |
| Escherichia coli ECRC99 | 0.34 | KEDOAH_24100 | flgF | flagellar basal-body rod protein FlgF | 0.30 | KEDOAH_06725 | qseF | two-component system response regulator QseF/GlrR | — | — |
| Escherichia coli ECRC102 | 0.34 | NIAGMN_24175 | flgF | flagellar basal-body rod protein FlgF | 0.30 | NIAGMN_19265 | qseF | two-component system response regulator QseF/GlrR | low | > 80 |
| Escherichia coli ECRC100 | 0.34 | OKFHMN_03655 | flgF | flagellar basal-body rod protein FlgF | 0.30 | OKFHMN_21495 | qseF | two-component system response regulator QseF/GlrR | low | > 79 |
| Escherichia coli ECRC101 | 0.34 | MCAODC_23015 | flgF | flagellar basal-body rod protein FlgF | 0.30 | MCAODC_12025 | qseF | two-component system response regulator QseF/GlrR | low | > 88 |
| Escherichia coli ECRC62 | 0.34 | BNILDI_19345 | flgF | flagellar basal-body rod protein FlgF | 0.30 | BNILDI_11970 | qseF | two-component system response regulator QseF/GlrR | low | > 75 |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_07315 | flgF | flagellar basal-body rod protein FlgF | 0.30 | JDDGAC_25160 | qseF | two-component system response regulator QseF/GlrR | low | > 87 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_15940 | | flagellar basal body rod protein FlgF | 0.31 | IAI46_19460 | | two-component system response regulator GlrR | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.33 | GFF3358 | | Flagellar basal-body rod protein FlgF | 0.31 | GFF2455 | | Putative sensory histidine kinase YfhA | 0.58 | 75 |
| Caulobacter crescentus NA1000 | 0.24 | CCNA_02142 | | flagellar basal-body rod protein flgF | 0.31 | CCNA_00954 | | AAA-family response regulator flbD | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.24 | CCNA_02142 | | flagellar basal-body rod protein flgF | 0.31 | CCNA_00954 | | AAA-family response regulator flbD | low | > 67 |
| Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS32140 | | flagellar basal body rod protein FlgG | 0.30 | AZOBR_RS20165 | | ATPase AAA | low | > 97 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.20 | A4249_RS09620 | | flagellar basal-body rod protein FlgF | 0.30 | A4249_RS09765 | | sigma-54 dependent transcriptional regulator | low | > 48 |
| Bosea sp. OAE506 | 0.19 | ABIE41_RS13415 | | flagellar basal-body rod protein FlgF | 0.30 | ABIE41_RS10895 | | sigma-54 dependent transcriptional regulator | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.17 | AMB_RS17685 | | flagellar basal-body rod protein FlgF | 0.32 | AMB_RS02570 | | sigma-54-dependent Fis family transcriptional regulator | low | > 64 |
Not shown: 48 genomes with orthologs for CSW01_11205 only; 4 genomes with orthologs for CSW01_10660 only