Conservation of cofitness between CSW01_00395 and CSW01_10645 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00395 ribosomal RNA small subunit methyltransferase J 1.0 CSW01_10645 flagellar motor switch protein FliG 0.72 6
Shewanella amazonensis SB2B 0.61 Sama_3564 hypothetical protein (RefSeq) 0.69 Sama_2296 fliG flagellar motor switch protein G (RefSeq) low > 62
Shewanella sp. ANA-3 0.60 Shewana3_4037 hypothetical protein (RefSeq) 0.70 Shewana3_1343 fliG flagellar motor switch protein G (RefSeq) low > 73
Shewanella loihica PV-4 0.58 Shew_3647 hypothetical protein (RefSeq) 0.69 Shew_1367 fliG flagellar motor switch protein G (RefSeq) low > 60
Rahnella sp. WP5 0.56 EX31_RS05160 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.37 EX31_RS09545 flagellar motor switch protein FliG low > 89
Serratia liquefaciens MT49 0.56 IAI46_24205 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.38 IAI46_15845 flagellar motor switch protein FliG low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00206 Ribosomal RNA small subunit methyltransferase J 0.36 OHPLBJKB_01790 Flagellar motor switch protein FliG low > 74
Escherichia fergusonii Becca 0.55 EFB2_00318 Ribosomal RNA small subunit methyltransferase J 0.36 EFB2_02007 Flagellar motor switch protein FliG low > 86
Escherichia coli BW25113 0.55 b3497 yhiQ predicted SAM-dependent methyltransferase (NCBI) 0.36 b1939 fliG flagellar motor switch protein G (NCBI) low > 76
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19980 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 ECOLIN_RS11065 flagellar motor switch protein FliG low > 55
Escherichia coli ECRC99 0.55 KEDOAH_11725 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 KEDOAH_02385 fliG flagellar motor switch protein FliG — —
Escherichia coli ECOR38 0.55 HEPCGN_15330 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 HEPCGN_04070 fliG flagellar motor switch protein FliG low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF518 rRNA small subunit methyltransferase J 0.37 GFF4017 Flagellar motor switch protein FliG low > 78
Escherichia coli ECRC101 0.55 MCAODC_06935 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 MCAODC_19685 fliG flagellar motor switch protein FliG low > 87
Escherichia coli ECRC100 0.55 OKFHMN_16420 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 OKFHMN_25710 fliG flagellar motor switch protein FliG low > 79
Escherichia coli ECRC102 0.55 NIAGMN_14185 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 NIAGMN_02345 fliG flagellar motor switch protein FliG low > 80
Escherichia coli ECRC98 0.55 JDDGAC_20050 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 JDDGAC_00295 fliG flagellar motor switch protein FliG low > 87
Escherichia coli ECOR27 0.55 NOLOHH_08355 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 NOLOHH_16340 fliG flagellar motor switch protein FliG low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4064 Putative SAM-dependent methyltransferase 0.37 EX28DRAFT_0615 flagellar motor switch protein FliG low > 76
Escherichia coli ECRC62 0.55 BNILDI_03205 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.36 BNILDI_15130 fliG flagellar motor switch protein FliG low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS21270 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.39 DDA3937_RS13370 flagellar motor switch protein FliG low > 74
Erwinia amylovora T8 0.54 OLJFJH_04525 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.39 OLJFJH_15360 flagellar motor switch protein FliG low > 58
Pectobacterium carotovorum WPP14 0.54 HER17_RS21305 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.39 HER17_RS08275 flagellar motor switch protein FliG low > 75
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_12595 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.38 IJEDHG_21230 fliG flagellar motor switch protein FliG low > 61
Erwinia tracheiphila SCR3 0.53 LU632_RS19465 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.38 LU632_RS10570 fliG flagellar motor switch protein FliG low > 73
Enterobacter sp. TBS_079 0.53 MPMX20_04396 Ribosomal RNA small subunit methyltransferase J 0.37 MPMX20_02936 Flagellar motor switch protein FliG low > 85
Pantoea sp. MT58 0.52 IAI47_01350 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.37 IAI47_08025 flagellar motor switch protein FliG low > 76
Pantoea agglomerans CFBP13505 P0401 0.52 PagCFBP13505_RS17850 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.37 PagCFBP13505_RS01935 flagellar motor switch protein FliG low > 74
Dickeya dianthicola ME23 0.50 DZA65_RS00030 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.40 DZA65_RS13900 flagellar motor switch protein FliG low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS00040 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.40 HGI48_RS13415 flagellar motor switch protein FliG low > 71
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_1325 Protein of unknown function DUF548 0.55 Psyr_3456 Flagellar motor switch protein FliG — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_1325 Protein of unknown function DUF548 0.55 Psyr_3456 Flagellar motor switch protein FliG low > 86
Pseudomonas segetis P6 0.41 MPMX49_01631 Ribosomal RNA small subunit methyltransferase J 0.56 MPMX49_03144 Flagellar motor switch protein FliG low > 75
Pseudomonas stutzeri RCH2 0.41 Psest_1563 Protein of unknown function (DUF548). 0.56 Psest_1720 flagellar motor switch protein FliG low > 67
Pseudomonas sp. S08-1 0.41 OH686_06755 16S rRNA (guanine(1516)-N(2))-methyltransferase 0.56 OH686_02830 flagellar motor switch protein FliG low > 80
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18790 Ribosomal RNA small subunit methyltransferase J 0.57 IKLFDK_05070 flagellar motor switch protein G low > 98
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS42550 class I SAM-dependent methyltransferase 0.57 DQ20_RS45895 fliG;go_component=bacterial-type flagellar motor switch protein FliG low > 101
Pseudomonas sp. SVBP6 0.40 COO64_RS19535 class I SAM-dependent methyltransferase 0.55 COO64_RS21275 fliG flagellar motor switch protein FliG low > 93
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3060 SAM-dependent methyltransferase (EC 2.1.1.-) 0.56 Pf1N1B4_3605 Flagellar motor switch protein FliG — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_16350 SAM-dependent methyltransferase 0.56 AO353_18685 flagellar motor switch protein FliG low > 101
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS14575 class I SAM-dependent methyltransferase 0.57 DY961_RS06940 fliG;go_component=bacterial-type flagellar motor switch protein FliG low > 100
Pseudomonas sp. BP01 0.39 JOY50_RS26070 class I SAM-dependent methyltransferase 0.55 JOY50_RS00680 fliG flagellar motor switch protein FliG low > 84
Pseudomonas putida KT2440 0.39 PP_1513 Ribosomal RNA small subunit methyltransferase J 0.55 PP_4368 flagellar motor switch protein low > 96
Pseudomonas orientalis W4I3 0.39 QF045_RS08950 class I SAM-dependent methyltransferase 0.55 QF045_RS21930 flagellar motor switch protein FliG low > 93
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_06145 SAM-dependent methyltransferase 0.56 AO356_03830 flagellar motor switch protein FliG low > 104
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4733 SAM-dependent methyltransferase (EC 2.1.1.-) 0.56 PfGW456L13_4352 Flagellar motor switch protein FliG low > 87
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.55 PFLU_RS21770 flagellar motor switch protein FliG low > 109
Pseudomonas sp. DMC3 0.38 GFF2031 Ribosomal RNA small subunit methyltransferase J 0.56 GFF2450 Flagellar motor switch protein FliG 0.74 3
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01390 Ribosomal RNA small subunit methyltransferase J 0.55 GEMAOFIL_04158 Flagellar motor switch protein FliG low > 96
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.55 PFLU_RS21770 flagellar motor switch protein FliG low > 109
Pseudomonas simiae WCS417 0.38 PS417_06100 SAM-dependent methyltransferase 0.55 PS417_19800 flagellar motor switch protein FliG low > 88
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3094 SAM-dependent methyltransferase (EC 2.1.1.-) 0.56 Pf6N2E2_2592 Flagellar motor switch protein FliG low > 103
Alteromonas macleodii MIT1002 0.38 MIT1002_00112 Ribosomal RNA small subunit methyltransferase J 0.69 MIT1002_01086 Flagellar motor switch protein FliG low > 70
Pseudomonas sp. RS175 0.37 PFR28_00376 Ribosomal RNA small subunit methyltransferase J 0.56 PFR28_00833 Flagellar motor switch protein FliG low > 88

Not shown: 4 genomes with orthologs for CSW01_00395 only; 43 genomes with orthologs for CSW01_10645 only