Conservation of cofitness between CSW01_17810 and CSW01_10220 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17810 cobyric acid synthase CobQ 1.0 CSW01_10220 DNA topoisomerase III 0.63 12
Pseudomonas sp. BP01 0.62 JOY50_RS27965 cobyric acid synthase 0.34 JOY50_RS06610 DNA topoisomerase III low > 84
Pseudomonas putida KT2440 0.62 PP_1677 Adenosyl-cobyric acid synthase 0.34 PP_4019 DNA topoisomerase III low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.34 Psyr_2244 DNA topoisomerase III low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.34 Psyr_2244 DNA topoisomerase III low > 86
Pseudomonas sp. SVBP6 0.60 COO64_RS07225 cobyric acid synthase 0.32 COO64_RS23235 DNA topoisomerase III low > 93
Shewanella sp. ANA-3 0.60 Shewana3_3275 cobyric acid synthase (RefSeq) 0.54 Shewana3_1486 DNA topoisomerase III (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.60 Psest_3008 cobyric acid synthase CobQ 0.34 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid low > 67
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.32 PfGW456L13_3568 DNA topoisomerase III (EC 5.99.1.2) low > 87
Shewanella oneidensis MR-1 0.60 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) 0.54 SO3061 topB DNA topoisomerase III (NCBI ptt file) low > 76
Pseudomonas sp. DMC3 0.60 GFF2552 Cobyric acid synthase 0.32 GFF1711 DNA topoisomerase 3 low > 89
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.33 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.33 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster low > 103
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_02615 cobyric acid synthase 0.33 AO353_26780 DNA topoisomerase III low > 101
Pseudomonas simiae WCS417 0.59 PS417_20040 cobyric acid synthase 0.33 PS417_10550 DNA topoisomerase III low > 88
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_04205 Cobyric acid synthase 0.33 GEMAOFIL_02205 DNA topoisomerase 3 low > 96
Pseudomonas orientalis W4I3 0.59 QF045_RS22155 cobyric acid synthase 0.32 QF045_RS12525 DNA topoisomerase III low > 93
Shewanella loihica PV-4 0.59 Shew_0717 cobyric acid synthase (RefSeq) 0.55 Shew_2299 DNA topoisomerase III (RefSeq) low > 60
Pseudomonas sp. RS175 0.59 PFR28_03204 Cobyric acid synthase 0.33 PFR28_01342 DNA topoisomerase 3 low > 88
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS22005 cobyric acid synthase 0.33 PFLU_RS10610 DNA topoisomerase III low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS22005 cobyric acid synthase 0.33 PFLU_RS10610 DNA topoisomerase III low > 109
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_19160 cobyric acid synthase 0.33 AO356_21700 DNA topoisomerase III low > 104
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS16075 cobyric acid synthase 0.28 RR42_RS24470 hypothetical protein low > 128
Shewanella amazonensis SB2B 0.55 Sama_0765 cobyric acid synthase (RefSeq) 0.54 Sama_2145 DNA topoisomerase III (RefSeq) low > 62
Azospirillum brasilense Sp245 0.47 AZOBR_RS09845 cobyric acid synthase 0.17 AZOBR_RS10830 DNA topoisomerase III low > 97
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3966 Cobyric acid synthase (EC 6.3.5.10) 0.56 GFF3486 DNA topoisomerase III (EC 5.99.1.2) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS23010 cobyric acid synthase CobQ 0.56 BWI76_RS11605 DNA topoisomerase III 0.23 12
Klebsiella pneumoniae MKP103 0.41 KDGMDA_03575 cobyric acid synthase 0.56 KDGMDA_19285 DNA topoisomerase III 0.18 61
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS00930 cobyric acid synthase 0.24 HMPREF1078_RS01110 DNA topoisomerase 3 low > 61
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS01395 cobyric acid synthase 0.23 HMPREF1058_RS14305 DNA topoisomerase 3 low > 67
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS15660 cobyric acid synthase 0.23 ABI39_RS09935 DNA topoisomerase 3 low > 72

Not shown: 47 genomes with orthologs for CSW01_17810 only; 33 genomes with orthologs for CSW01_10220 only