Conservation of cofitness between CSW01_01040 and CSW01_09535 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01040 protein RarD 1.0 CSW01_09535 alanine dehydrogenase 0.70 7
Shewanella sp. ANA-3 0.60 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.77 Shewana3_2048 L-alanine dehydrogenase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.57 Sama_0332 rarD protein (RefSeq) 0.75 Sama_1770 alanine dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.56 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.76 Shew_2026 alanine dehydrogenase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.52 MIT1002_00151 putative chloramphenical resistance permease RarD 0.62 MIT1002_02183 Alanine dehydrogenase low > 70
Pseudomonas segetis P6 0.42 MPMX49_00754 Protein RarD 0.59 MPMX49_00671 Alanine dehydrogenase low > 75
Marinobacter adhaerens HP15 0.41 HP15_2670 RarD protein, DMT superfamily transporter 0.60 HP15_3370 alanine dehydrogenase low > 73
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS20410 transporter 0.62 RR42_RS10640 alanine dehydrogenase low > 128
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS26035 EamA family transporter RarD 0.62 QEN71_RS20785 alanine dehydrogenase low > 153
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) 0.53 DvMF_2154 alanine dehydrogenase (RefSeq) low > 51
Azospirillum brasilense Sp245 0.39 AZOBR_RS04315 transporter 0.60 AZOBR_RS08510 alanine dehydrogenase low > 97
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.71 B158DRAFT_1823 alanine dehydrogenase low > 40
Phaeobacter inhibens DSM 17395 0.37 PGA1_c33100 protein RarD 0.58 PGA1_c30420 alanine dehydrogenase Ald low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU2425 rarD rarD protein (TIGR) 0.50 DVU0571 ald alanine dehydrogenase (TIGR) low > 55
Magnetospirillum magneticum AMB-1 0.36 AMB_RS06360 EamA family transporter RarD 0.56 AMB_RS22705 alanine dehydrogenase low > 64
Lysobacter sp. OAE881 0.35 ABIE51_RS03205 EamA family transporter RarD 0.36 ABIE51_RS11460 alanine dehydrogenase low > 62
Sinorhizobium meliloti 1021 0.35 SMc02545 hypothetical protein 0.62 SMc01169 alanine dehydrogenase oxidoreductase low > 103
Azospirillum sp. SherDot2 0.35 MPMX19_00476 Protein RarD 0.60 MPMX19_05501 Alanine dehydrogenase low > 112
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_3478 rarD protein 0.56 Ga0059261_3899 Alanine dehydrogenase (EC 1.4.1.1) (from data) low > 68
Rhizobium sp. OAE497 0.34 ABIE40_RS06215 EamA family transporter RarD 0.57 ABIE40_RS08260 alanine dehydrogenase low > 107
Sphingobium sp. HT1-2 0.34 GFF3086 Uncharacterized inner membrane protein RarD 0.58 GFF3650 Alanine dehydrogenase (EC 1.4.1.1) low > 95
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00254 RarD family membrane permease 0.55 CCNA_03689 alanine dehydrogenase low > 67
Caulobacter crescentus NA1000 0.33 CCNA_00254 RarD family membrane permease 0.55 CCNA_03689 alanine dehydrogenase low > 66
Rhodospirillum rubrum S1H 0.31 Rru_A0706 RarD protein (NCBI) 0.60 Rru_A3686 Alanine dehydrogenase and pyridine nucleotide transhydrogenase (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS34860 chemotaxis protein 0.58 BPHYT_RS25440 alanine dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.16 ABIE53_004634 chloramphenicol-sensitive protein RarD 0.67 ABIE53_005197 alanine dehydrogenase low > 113
Acinetobacter radioresistens SK82 0.16 MPMX26_02140 Protein RarD 0.15 MPMX26_00054 N(5)-(carboxyethyl)ornithine synthase low > 36
Pontibacter actiniarum KMM 6156, DSM 19842 0.14 CA264_15360 permease 0.57 CA264_04350 alanine dehydrogenase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS22830 permease 0.32 CA265_RS21515 alanine dehydrogenase low > 88

Not shown: 65 genomes with orthologs for CSW01_01040 only; 21 genomes with orthologs for CSW01_09535 only