Conservation of cofitness between CSW01_10480 and CSW01_09290 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10480 histidine kinase 1.0 CSW01_09290 ATP-dependent DNA helicase DinG 0.55 4
Enterobacter sp. TBS_079 0.48 MPMX20_01332 Esterase YbfF 0.25 MPMX20_01426 ATP-dependent DNA helicase DinG low > 85
Pectobacterium carotovorum WPP14 0.48 HER17_RS15070 esterase 0.25 HER17_RS13230 ATP-dependent DNA helicase DinG low > 75
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2289 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 0.24 EX28DRAFT_2193 Rad3-related DNA helicases low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS03720 esterase 0.24 ECOLIN_RS04255 ATP-dependent DNA helicase DinG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03029 Esterase YbfF 0.24 OHPLBJKB_02914 putative ATP-dependent helicase DinG low > 74
Escherichia fergusonii Becca 0.45 EFB2_03408 Esterase YbfF 0.24 EFB2_03306 ATP-dependent DNA helicase DinG low > 86
Escherichia coli BL21 0.45 ECD_00643 acyl-CoA esterase 0.24 ECD_00766 ATP-dependent DNA helicase low > 61
Pantoea sp. MT58 0.45 IAI47_13845 esterase 0.24 IAI47_13295 ATP-dependent DNA helicase DinG low > 76
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS03460 esterase 0.25 PagCFBP13505_RS04025 ATP-dependent DNA helicase DinG low > 74
Klebsiella michiganensis M5al 0.45 BWI76_RS08280 acyl-CoA esterase 0.25 BWI76_RS08920 ATP-dependent DNA helicase DinG low > 92
Escherichia coli ECRC62 0.45 BNILDI_21495 ybfF esterase 0.24 BNILDI_20910 dinG ATP-dependent DNA helicase DinG low > 75
Escherichia coli BW25113 0.45 b0686 ybfF hypothetical protein (NCBI) 0.24 b0799 dinG ATP-dependent DNA helicase (NCBI) low > 76
Escherichia coli ECOR27 0.45 NOLOHH_23490 ybfF esterase 0.24 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG low > 76
Escherichia coli ECOR38 0.45 HEPCGN_01115 ybfF esterase 0.24 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG low > 88
Rahnella sp. WP5 0.45 EX31_RS23310 esterase 0.24 EX31_RS19020 ATP-dependent DNA helicase DinG low > 89
Escherichia coli ECRC100 0.44 OKFHMN_07110 ybfF esterase 0.24 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG low > 79
Klebsiella pneumoniae MKP103 0.44 KDGMDA_16605 esterase 0.24 KDGMDA_17185 ATP-dependent DNA helicase DinG low > 95
Escherichia coli ECRC101 0.44 MCAODC_26325 ybfF esterase 0.24 MCAODC_25495 dinG ATP-dependent DNA helicase DinG low > 87
Escherichia coli ECRC102 0.44 NIAGMN_05165 ybfF esterase 0.24 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG low > 80
Escherichia coli ECRC98 0.44 JDDGAC_10760 ybfF esterase 0.24 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG low > 87
Escherichia coli ECRC99 0.44 KEDOAH_20860 ybfF esterase 0.24 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF4599 Esterase ybfF (EC 3.1.-.-) 0.25 GFF697 ATP-dependent helicase DinG/Rad3 low > 78
Erwinia tracheiphila SCR3 0.44 LU632_RS16180 ybfF esterase 0.24 LU632_RS09400 dinG ATP-dependent DNA helicase DinG low > 73
Dickeya dianthicola 67-19 0.43 HGI48_RS06390 esterase 0.24 HGI48_RS08850 ATP-dependent DNA helicase DinG low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS06735 esterase 0.24 DZA65_RS09155 ATP-dependent DNA helicase DinG low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS06345 esterase 0.24 DDA3937_RS08765 ATP-dependent DNA helicase DinG low > 74
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_02235 alpha/beta hydrolase 0.24 IJEDHG_19865 dinG ATP-dependent DNA helicase DinG low > 61
Erwinia amylovora T8 0.43 OLJFJH_17045 esterase 0.26 OLJFJH_16560 ATP-dependent DNA helicase DinG low > 58
Serratia liquefaciens MT49 0.42 IAI46_06135 esterase 0.25 IAI46_07445 ATP-dependent DNA helicase DinG low > 87
Shewanella loihica PV-4 0.38 Shew_1920 alpha/beta hydrolase fold (RefSeq) 0.49 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_2136 alpha/beta hydrolase fold (RefSeq) 0.51 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) low > 73
Shewanella amazonensis SB2B 0.37 Sama_1704 alpha/beta fold family hydrolase (RefSeq) 0.49 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) low > 62
Shewanella oneidensis MR-1 0.36 SO2333 hydrolase, alpha/beta fold family (NCBI ptt file) 0.51 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.36 HP15_260 hydrolase, alpha/beta fold family protein 0.31 HP15_1856 helicase c2 low > 73
Pseudomonas sp. SVBP6 0.15 COO64_RS21960 alpha/beta fold hydrolase 0.31 COO64_RS17020 dinG ATP-dependent DNA helicase DinG low > 93
Pseudomonas sp. S08-1 0.15 OH686_05455 Beta-ketoadipate enol-lactone hydrolase 0.31 OH686_04830 ATP-dependent helicase DinG/Rad3 low > 80
Pseudomonas lactucae CFBP13502 0.15 GEMAOFIL_02001 2-(acetamidomethylene)succinate hydrolase 0.32 GEMAOFIL_01464 ATP-dependent DNA helicase DinG low > 96
Pseudomonas sp. RS175 0.14 PFR28_02852 Haloacetate dehalogenase H-1 0.32 PFR28_00520 ATP-dependent DNA helicase DinG low > 88
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_111 Possible oxidoreductase 0.31 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 — —
Pseudomonas orientalis W4I3 0.14 QF045_RS19825 alpha/beta hydrolase 0.31 QF045_RS09310 ATP-dependent DNA helicase DinG low > 93
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS14970 alpha/beta hydrolase 0.32 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_36 Possible oxidoreductase 0.32 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 low > 103
Pseudomonas fluorescens SBW25 0.14 PFLU_RS14970 alpha/beta hydrolase 0.32 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_29180 alpha/beta hydrolase 0.31 AO353_17020 ATP-dependent DNA helicase DinG low > 101
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_2446 Possible oxidoreductase 0.31 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 low > 87
Pseudomonas aeruginosa PA14 0.12 IKLFDK_03640 alpha/beta hydrolase 0.31 IKLFDK_04780 ATP-dependent DNA helicase DinG low > 98
Pseudomonas aeruginosa PUPa3 0.12 DQ20_RS44475 alpha/beta hydrolase 0.31 DQ20_RS45550 dinG;go_function=DNA ATP-dependent DNA helicase DinG low > 101
Pseudomonas aeruginosa MRSN321 0.12 DY961_RS08350 alpha/beta hydrolase 0.31 DY961_RS07235 dinG;go_function=DNA ATP-dependent DNA helicase DinG low > 100
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS07830 alpha/beta hydrolase 0.29 ABZR86_RS16845 ATP-dependent DNA helicase DinG low > 74

Not shown: 24 genomes with orthologs for CSW01_10480 only; 16 genomes with orthologs for CSW01_09290 only