Conservation of cofitness between CSW01_04870 and CSW01_09260 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04870 ribosome silencing factor 1.0 CSW01_09260 peptidylprolyl isomerase 0.47 12
Dickeya dianthicola 67-19 0.71 HGI48_RS06225 ribosome silencing factor 0.69 HGI48_RS15175 peptidylprolyl isomerase B low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS15235 ribosome silencing factor 0.69 HER17_RS06485 peptidylprolyl isomerase B — —
Pantoea sp. MT58 0.70 IAI47_14015 ribosome silencing factor 0.67 IAI47_14340 peptidylprolyl isomerase B — —
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS03290 ribosome silencing factor 0.66 PagCFBP13505_RS10870 peptidylprolyl isomerase B — —
Dickeya dianthicola ME23 0.70 DZA65_RS06570 ribosome silencing factor 0.69 DZA65_RS15980 peptidylprolyl isomerase B — —
Dickeya dadantii 3937 0.69 DDA3937_RS06180 ribosome silencing factor 0.68 DDA3937_RS15095 peptidylprolyl isomerase B — —
Enterobacter sp. TBS_079 0.67 MPMX20_01296 Ribosomal silencing factor RsfS 0.66 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B low > 85
Escherichia coli BL21 0.67 ECD_00606 ribosomal silencing factor 0.67 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS03470 ribosome silencing factor 0.67 ECOLIN_RS03045 peptidylprolyl isomerase B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03069 Ribosomal silencing factor RsfS 0.67 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia fergusonii Becca 0.67 EFB2_03455 Ribosomal silencing factor RsfS 0.67 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli BW25113 0.67 b0637 ybeB orf, hypothetical protein (VIMSS) 0.67 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) — —
Escherichia coli ECRC98 0.67 JDDGAC_11000 rsfS ribosome silencing factor 0.67 JDDGAC_11475 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC101 0.67 MCAODC_26570 rsfS ribosome silencing factor 0.67 MCAODC_27045 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC100 0.67 OKFHMN_07355 rsfS ribosome silencing factor 0.67 OKFHMN_07825 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC102 0.67 NIAGMN_05410 rsfS ribosome silencing factor 0.67 NIAGMN_05880 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR38 0.67 HEPCGN_00920 rsfS ribosome silencing factor 0.68 HEPCGN_06465 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC62 0.67 BNILDI_21740 rsfS ribosome silencing factor 0.67 BNILDI_22245 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC99 0.67 KEDOAH_20615 rsfS ribosome silencing factor 0.67 KEDOAH_20145 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR27 0.67 NOLOHH_23730 rsfS ribosome silencing factor 0.67 NOLOHH_00815 ppiB peptidylprolyl isomerase B — —
Erwinia amylovora T8 0.66 OLJFJH_17215 ribosome silencing factor 0.68 OLJFJH_17620 peptidylprolyl isomerase B — —
Rahnella sp. WP5 0.65 EX31_RS23130 ribosome silencing factor 0.63 EX31_RS22640 peptidylprolyl isomerase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4550 Iojap protein 0.66 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Klebsiella pneumoniae MKP103 0.65 KDGMDA_16405 ribosome silencing factor 0.67 KDGMDA_15020 peptidylprolyl isomerase B — —
Serratia liquefaciens MT49 0.65 IAI46_05940 ribosome silencing factor 0.68 IAI46_05385 peptidylprolyl isomerase B — —
Klebsiella michiganensis M5al 0.65 BWI76_RS08045 ribosome silencing factor RsfS 0.67 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase — —
Shewanella oneidensis MR-1 0.62 SO1170 iojap domain protein (NCBI ptt file) 0.76 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_0997 iojap-like protein (RefSeq) 0.76 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) — —
Erwinia tracheiphila SCR3 0.59 LU632_RS16365 rsfS ribosome silencing factor 0.67 LU632_RS15235 ppiB peptidylprolyl isomerase B — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01853 Ribosomal silencing factor RsfS 0.65 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B low > 70
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_02455 rsfS ribosome silencing factor 0.67 IJEDHG_01010 ppiB peptidylprolyl isomerase B — —
Shewanella amazonensis SB2B 0.58 Sama_2586 iojap domain-containing protein (RefSeq) 0.78 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_2933 iojap-like protein (RefSeq) 0.72 Shew_2512 peptidylprolyl isomerase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0086 iojap-like ribosome-associated protein 0.61 B158DRAFT_1021 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 40
Pseudomonas aeruginosa MRSN321 0.53 DY961_RS12830 rsfS;go_function=ribosome ribosome silencing factor 0.66 DY961_RS20660 peptidylprolyl isomerase low > 100
Pseudomonas aeruginosa PA14 0.53 IKLFDK_20655 ribosome silencing factor 0.66 IKLFDK_08675 peptidylprolyl isomerase — —
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS48160 rsfS;go_function=ribosome ribosome silencing factor 0.66 DQ20_RS54740 peptidylprolyl isomerase low > 101
Pseudomonas sp. S08-1 0.50 OH686_09330 ribosome silencing factor 0.63 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB low > 80
Marinobacter adhaerens HP15 0.48 HP15_603 Iojap-related protein 0.63 HP15_2190 peptidyl-prolyl cis-trans isomerase B low > 73
Pseudomonas segetis P6 0.48 MPMX49_01050 Ribosomal silencing factor RsfS 0.61 MPMX49_02245 Peptidyl-prolyl cis-trans isomerase B — —
Pseudomonas stutzeri RCH2 0.47 Psest_0510 iojap-like ribosome-associated protein 0.63 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4367 Iojap-related protein 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.40 80
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4367 Iojap-related protein 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Methylophilus sp. DMC18 0.43 GFF826 Ribosomal silencing factor RsfS 0.61 GFF2571 Peptidyl-prolyl cis-trans isomerase cyp18 low > 43
Rhodopseudomonas palustris CGA009 0.41 TX73_000865 ribosome silencing factor 0.25 TX73_013475 peptidylprolyl isomerase low > 86
Dechlorosoma suillum PS 0.40 Dsui_0452 iojap-like ribosome-associated protein 0.63 Dsui_3088 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 51
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS16245 ribosome silencing factor 0.18 HMPREF1078_RS10350 peptidylprolyl isomerase low > 61

Not shown: 7 genomes with orthologs for CSW01_04870 only; 49 genomes with orthologs for CSW01_09260 only