| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09555 | | tRNA-(ms[2]io[6]A)-hydroxylase | 1.0 | CSW01_08445 | | ABC transporter substrate-binding protein | 0.79 | 16 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS05765 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.39 | DDA3937_RS12440 | | peptide ABC transporter substrate-binding protein SapA | 0.46 | 16 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_02330 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.40 | IAI46_13525 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.63 | PagCFBP13505_RS08940 | | tRNA hydroxylase | 0.39 | PagCFBP13505_RS06770 | | peptide ABC transporter substrate-binding protein SapA | low | > 74 |
| Pantoea sp. MT58 | 0.63 | IAI47_16820 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.40 | IAI47_09380 | | peptide ABC transporter substrate-binding protein SapA | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_02520 | | tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) | 0.35 | MIT1002_01141 | | Dipeptide-binding protein | low | > 70 |
| Shewanella loihica PV-4 | 0.62 | Shew_2514 | | tRNA--hydroxylase (RefSeq) | 0.37 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF942 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | 0.38 | GFF2688 | | Peptide transport periplasmic protein SapA | low | > 78 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_00558 | | hypothetical protein | 0.40 | MPMX20_02474 | | Peptide transport periplasmic protein SapA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.61 | EX28DRAFT_3463 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | 0.41 | EX28DRAFT_0974 | | ABC-type oligopeptide transport system, periplasmic component | low | > 76 |
| Erwinia tracheiphila HP pepo 2.2 | 0.60 | IJEDHG_14135 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.38 | IJEDHG_23005 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 61 |
| Shewanella amazonensis SB2B | 0.59 | Sama_1218 | | tRNA-hydroxylase (RefSeq) | 0.36 | Sama_1235 | | peptide ABC transporter, periplasmic peptide-binding protein (RefSeq) | low | > 62 |
| Klebsiella pneumoniae MKP103 | 0.58 | KDGMDA_11510 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.40 | KDGMDA_19885 | | peptide ABC transporter substrate-binding protein SapA | low | > 95 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS03020 | | tRNA hydroxylase | 0.40 | BWI76_RS12420 | | peptide ABC transporter substrate-binding protein SapA | low | > 92 |
| Shewanella oneidensis MR-1 | 0.57 | SO1788 | miaE | tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) | 0.36 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_2667 | | tRNA hydroxylase (RefSeq) | 0.37 | Shewana3_2650 | | acetate kinase (RefSeq) | — | — |
| Rahnella sp. WP5 | 0.40 | EX31_RS22630 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.41 | EX31_RS15700 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.35 | DQ20_RS54725 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.31 | DQ20_RS56435 | | ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.35 | DY961_RS20645 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.31 | DY961_RS23975 | | ABC transporter substrate-binding protein | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.34 | IKLFDK_08660 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.31 | IKLFDK_01580 | | Di/tripeptide-binding protein 3 | low | > 98 |
| Pseudomonas sp. SVBP6 | 0.34 | COO64_RS09940 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.31 | COO64_RS04105 | | ABC transporter substrate-binding protein | low | > 93 |
| Pseudomonas sp. BP01 | 0.33 | JOY50_RS12775 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.30 | JOY50_RS10980 | | ABC transporter substrate-binding protein | low | > 84 |
| Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_1015 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | 0.32 | B158DRAFT_1047 | | ABC-type dipeptide transport system, periplasmic component | low | > 40 |
| Pseudomonas simiae WCS417 | 0.32 | PS417_14975 | | tRNA hydroxylase | 0.30 | PS417_04075 | | peptide ABC transporter substrate-binding protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.32 | PP_2188 | | putative tRNA-(Ms(2)io(6)a)-hydroxylase | 0.30 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | low | > 96 |
| Pseudomonas segetis P6 | 0.32 | MPMX49_02239 | | hypothetical protein | 0.32 | MPMX49_03884 | | Periplasmic dipeptide transport protein | low | > 75 |
| Pseudomonas sp. DMC3 | 0.32 | GFF1701 | | hypothetical protein | 0.32 | GFF5023 | | Periplasmic dipeptide transport protein | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_3375 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | 0.31 | PfGW456L13_5054 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.32 | OH686_03955 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.31 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_22955 | | tRNA hydroxylase | 0.30 | AO353_05370 | | peptide ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.32 | GEMAOFIL_03299 | | hypothetical protein | 0.30 | GEMAOFIL_01020 | | Periplasmic dipeptide transport protein | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_4567 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | 0.32 | Pf1N1B4_1121 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_24405 | | tRNA hydroxylase | 0.31 | AO356_07255 | | peptide ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.31 | QF045_RS14985 | | tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE | 0.30 | QF045_RS07080 | | ABC transporter substrate-binding protein | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_568 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | 0.31 | Pf6N2E2_3310 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 103 |
| Pseudomonas sp. RS175 | 0.31 | PFR28_02373 | | hypothetical protein | 0.32 | PFR28_00128 | | Periplasmic dipeptide transport protein | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.30 | Psyr_1728 | | tRNA--hydroxylase | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.30 | Psyr_1728 | | tRNA--hydroxylase | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS01640 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.12 | ABZR88_RS16670 | | ABC transporter substrate-binding protein | low | > 71 |
Not shown: 6 genomes with orthologs for CSW01_09555 only; 37 genomes with orthologs for CSW01_08445 only