| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03335 | | ribosome assembly RNA-binding protein YhbY | 1.0 | CSW01_07810 | | glycerophosphoryl diester phosphodiesterase | 0.56 | 2 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.82 | GFF2921 | | FIG004454: RNA binding protein | 0.19 | GFF559 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | low | > 78 |
| Pantoea agglomerans CFBP13505 P0401 | 0.82 | PagCFBP13505_RS09170 | | ribosome assembly RNA-binding protein YhbY | 0.23 | PagCFBP13505_RS18125 | | glycerophosphodiester phosphodiesterase | low | > 74 |
| Pantoea sp. MT58 | 0.81 | IAI47_17075 | | ribosome assembly RNA-binding protein YhbY | 0.23 | IAI47_01610 | | glycerophosphodiester phosphodiesterase | low | > 76 |
| Escherichia fergusonii Becca | 0.81 | EFB2_00643 | | RNA-binding protein YhbY | 0.20 | EFB2_00373 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 86 |
| Escherichia coli ECRC62 | 0.81 | BNILDI_01685 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.19 | BNILDI_02925 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 75 |
| Escherichia coli ECOR27 | 0.81 | NOLOHH_09850 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.19 | NOLOHH_08580 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 76 |
| Escherichia coli Nissle 1917 | 0.81 | ECOLIN_RS18315 | | ribosome assembly RNA-binding protein YhbY | 0.19 | ECOLIN_RS19725 | | glycerophosphodiester phosphodiesterase | low | > 55 |
| Escherichia coli BL21 | 0.81 | ECD_03045 | | RNA binding protein | 0.20 | ECD_03298 | | glycerophosphodiester phosphodiesterase, cytosolic | low | > 61 |
| Escherichia coli ECRC98 | 0.81 | JDDGAC_21675 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.20 | JDDGAC_20420 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 87 |
| Escherichia coli ECOR38 | 0.81 | HEPCGN_16925 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.19 | HEPCGN_15610 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 88 |
| Escherichia coli ECRC102 | 0.81 | NIAGMN_15810 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.20 | NIAGMN_14560 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 80 |
| Escherichia coli BW25113 | 0.81 | b3180 | yhbY | predicted RNA-binding protein (NCBI) | 0.20 | b3449 | ugpQ | cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.81 | MCAODC_08570 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.20 | MCAODC_07320 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 87 |
| Escherichia coli ECRC100 | 0.81 | OKFHMN_18050 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.20 | OKFHMN_16790 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 79 |
| Escherichia coli ECRC99 | 0.81 | KEDOAH_10100 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.20 | KEDOAH_11350 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.81 | OHPLBJKB_00520 | | RNA-binding protein YhbY | 0.20 | OHPLBJKB_00254 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 74 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_3231 | | putative RNA-binding protein, YhbY family | 0.20 | EX28DRAFT_4281 | | Glycerophosphoryl diester phosphodiesterase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_04084 | | RNA-binding protein YhbY | 0.18 | MPMX20_04325 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 85 |
| Klebsiella michiganensis M5al | 0.80 | BWI76_RS25155 | | RNA-binding protein | 0.20 | BWI76_RS26285 | | glycerophosphodiester phosphodiesterase | — | — |
| Serratia liquefaciens MT49 | 0.80 | IAI46_01885 | | ribosome assembly RNA-binding protein YhbY | 0.22 | IAI46_01010 | | glycerophosphodiester phosphodiesterase | low | > 87 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS03190 | | ribosome assembly RNA-binding protein YhbY | 0.21 | HGI48_RS10830 | | glycerophosphoryl diester phosphodiesterase | — | — |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS03185 | | ribosome assembly RNA-binding protein YhbY | 0.22 | DZA65_RS11295 | | glycerophosphoryl diester phosphodiesterase | — | — |
| Klebsiella pneumoniae MKP103 | 0.80 | KDGMDA_05970 | | ribosome assembly RNA-binding protein YhbY | 0.19 | KDGMDA_07160 | | glycerophosphodiester phosphodiesterase | low | > 95 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS18325 | | ribosome assembly RNA-binding protein YhbY | 0.21 | HER17_RS00630 | | glycerophosphodiester phosphodiesterase | — | — |
| Shewanella amazonensis SB2B | 0.78 | Sama_0952 | | RNA-binding protein (RefSeq) | 0.17 | Sama_3037 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | low | > 62 |
| Erwinia tracheiphila HP pepo 2.2 | 0.77 | IJEDHG_13870 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.17 | IJEDHG_07970 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 61 |
| Erwinia amylovora T8 | 0.77 | OLJFJH_07190 | | ribosome assembly RNA-binding protein YhbY | 0.22 | OLJFJH_04310 | | glycerophosphodiester phosphodiesterase | low | > 58 |
| Shewanella sp. ANA-3 | 0.76 | Shewana3_1021 | | hypothetical protein (RefSeq) | 0.20 | Shewana3_0585 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.76 | SO1195 | | conserved hypothetical protein TIGR00253 (NCBI ptt file) | 0.19 | SO0587 | | glycerophosphoryl diester phosphodiesterase, putative (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.76 | Shew_2836 | | hypothetical protein (RefSeq) | 0.20 | Shew_0554 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | — | — |
| Rahnella sp. WP5 | 0.73 | EX31_RS08590 | | ribosome assembly RNA-binding protein YhbY | 0.22 | EX31_RS14740 | | glycerophosphodiester phosphodiesterase | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_01863 | | RNA-binding protein | 0.17 | MIT1002_00492 | | Glycerophosphoryl diester phosphodiesterase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_0633 | | putative RNA-binding protein, YhbY family | 0.22 | B158DRAFT_1230 | | Glycerophosphoryl diester phosphodiesterase | low | > 40 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_3075 | | RNA-binding, CRM domain, prokaryote | 0.17 | HP15_2244 | | glycerophosphoryl diester phosphodiesterase | low | > 73 |
| Acinetobacter baumannii LAC-4 | 0.46 | RR41_RS04175 | | ribosome assembly RNA-binding protein YhbY | 0.12 | RR41_RS03095 | | glycerophosphodiester phosphodiesterase | low | > 55 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_17095 | | RNA-binding protein YhbY | 0.16 | OH686_22010 | | Glycerophosphoryl diester phosphodiesterase | low | > 80 |
| Pseudomonas sp. BP01 | 0.44 | JOY50_RS26780 | | YhbY family RNA-binding protein | 0.16 | JOY50_RS25120 | | glycerophosphodiester phosphodiesterase | low | > 84 |
| Pseudomonas putida KT2440 | 0.44 | PP_4720 | | putative RNA binding protein | 0.17 | PP_2152 | | glycerophosphoryl diester phosphodiesterase | low | > 96 |
| Pseudomonas segetis P6 | 0.43 | ACVTMO_RS05900 | yhbY | ribosome assembly RNA-binding protein YhbY | 0.19 | ACVTMO_RS06145 | | glycerophosphodiester phosphodiesterase | low | > 75 |
| Pseudomonas lactucae CFBP13502 | 0.42 | GEMAOFIL_04955 | | RNA-binding protein | 0.16 | GEMAOFIL_01663 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | — | — |
| Pseudomonas simiae WCS417 | 0.42 | PS417_24025 | | RNA-binding protein | 0.16 | PS417_07655 | | glycerophosphodiester phosphodiesterase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS25865 | | YhbY family RNA-binding protein | 0.16 | PFLU_RS07730 | | glycerophosphodiester phosphodiesterase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS25865 | | YhbY family RNA-binding protein | 0.16 | PFLU_RS07730 | | glycerophosphodiester phosphodiesterase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_4189 | | Protein of unknown function UPF0044 | 0.23 | Psyr_4506 | | Glycerophosphodiester phosphodiesterase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_4189 | | Protein of unknown function UPF0044 | 0.23 | Psyr_4506 | | Glycerophosphodiester phosphodiesterase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_1169 | | FIG004454: RNA binding protein | 0.17 | Pf1N1B4_3920 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_05615 | | RNA-binding protein | 0.16 | AO353_00385 | | glycerophosphodiester phosphodiesterase | — | — |
| Pseudomonas orientalis W4I3 | 0.41 | QF045_RS26280 | | YhbY family RNA-binding protein | 0.16 | QF045_RS10300 | | glycerophosphodiester phosphodiesterase family protein | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_0971 | | Predicted RNA-binding protein containing KH domain, possibly ribosomal protein | 0.15 | Psest_1664 | | Glycerophosphoryl diester phosphodiesterase | — | — |
| Pseudomonas sp. DMC3 | 0.39 | GFF4980 | | RNA-binding protein | 0.17 | GFF1290 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | 0.55 | 75 |
| Fusobacterium nucleatum SB010 | 0.29 | HUW76_04210 | | ribosome assembly RNA-binding protein YhbY | 0.26 | HUW76_01715 | | glycerophosphodiester phosphodiesterase | low | > 35 |
Not shown: 20 genomes with orthologs for CSW01_03335 only; 26 genomes with orthologs for CSW01_07810 only