Conservation of cofitness between CSW01_05285 and CSW01_06950 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05285 AsmA family protein 1.0 CSW01_06950 ATP-dependent RNA helicase HrpA 0.48 17
Shewanella oneidensis MR-1 0.25 SO2566 asmA asmA protein (NCBI ptt file) 0.57 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.24 Shewana3_2372 AsmA protein (RefSeq) 0.57 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) low > 73
Serratia liquefaciens MT49 0.12 IAI46_07985 outer membrane assembly protein AsmA 0.70 IAI46_13330 ATP-dependent RNA helicase HrpA low > 87
Klebsiella pneumoniae MKP103 0.12 KDGMDA_26250 outer membrane assembly protein AsmA 0.71 KDGMDA_20775 ATP-dependent RNA helicase HrpA low > 95
Escherichia coli ECRC99 0.12 KEDOAH_03870 asmA outer membrane assembly protein AsmA 0.71 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA — —
Escherichia coli ECRC102 0.12 NIAGMN_22225 asmA outer membrane assembly protein AsmA 0.71 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA low > 80
Escherichia coli ECRC98 0.12 JDDGAC_28390 asmA outer membrane assembly protein AsmA 0.71 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA low > 87
Escherichia coli ECRC100 0.12 OKFHMN_24280 asmA outer membrane assembly protein AsmA 0.71 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA low > 79
Escherichia coli ECRC101 0.11 MCAODC_20660 asmA outer membrane assembly protein AsmA 0.71 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA low > 87
Erwinia tracheiphila HP pepo 2.2 0.11 IJEDHG_18850 asmA outer membrane assembly protein AsmA 0.69 IJEDHG_23640 hrpA ATP-dependent RNA helicase HrpA low > 61
Pantoea sp. MT58 0.11 IAI47_06915 outer membrane assembly protein AsmA 0.70 IAI47_09520 ATP-dependent RNA helicase HrpA low > 76
Escherichia coli ECRC62 0.11 BNILDI_14530 asmA outer membrane assembly protein AsmA 0.71 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA low > 75
Erwinia tracheiphila SCR3 0.11 LU632_RS08750 asmA outer membrane assembly protein AsmA 0.69 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA low > 73
Escherichia coli ECOR27 0.11 NOLOHH_15620 asmA outer membrane assembly protein AsmA 0.71 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA low > 76
Escherichia coli BW25113 0.11 b2064 asmA predicted assembly protein (NCBI) 0.71 b1413 hrpA ATP-dependent helicase (RefSeq) low > 76
Escherichia coli ECOR38 0.11 HEPCGN_02980 asmA outer membrane assembly protein AsmA 0.71 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA low > 88
Escherichia coli BL21 0.11 ECD_01970 suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein 0.71 ECD_01368 putative ATP-dependent helicase low > 61
Enterobacter sp. TBS_079 0.11 MPMX20_03046 hypothetical protein 0.71 MPMX20_02189 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF3863 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.72 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 78
Pantoea agglomerans CFBP13505 P0401 0.11 PagCFBP13505_RS01025 outer membrane assembly protein AsmA 0.70 PagCFBP13505_RS06635 ATP-dependent RNA helicase HrpA low > 74
Escherichia coli Nissle 1917 0.11 ECOLIN_RS12150 outer membrane assembly protein AsmA 0.71 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA — —
Rahnella sp. WP5 0.11 EX31_RS11535 outer membrane assembly protein AsmA 0.70 EX31_RS06495 ATP-dependent RNA helicase HrpA low > 89
Enterobacter asburiae PDN3 0.11 EX28DRAFT_0490 Uncharacterized protein involved in outer membrane biogenesis 0.71 EX28DRAFT_1357 RNA helicase HrpA low > 76
Pseudomonas stutzeri RCH2 0.11 Psest_0146 Uncharacterized protein involved in outer membrane biogenesis 0.43 Psest_1339 ATP-dependent helicase HrpA low > 67
Pseudomonas sp. S08-1 0.10 OH686_14555 A/G-specific adenine glycosylase 0.43 OH686_05730 RNA helicase HrpA low > 80
Pectobacterium carotovorum WPP14 0.10 HER17_RS14640 outer membrane assembly protein AsmA 0.69 HER17_RS09660 ATP-dependent RNA helicase HrpA low > 75
Marinobacter adhaerens HP15 0.10 HP15_3014 AsmA family protein 0.44 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Pseudomonas orientalis W4I3 0.10 QF045_RS04620 AsmA family protein 0.45 QF045_RS22485 ATP-dependent RNA helicase HrpA low > 93
Pseudomonas segetis P6 0.10 MPMX49_04305 hypothetical protein 0.43 MPMX49_03273 hypothetical protein low > 75
Erwinia amylovora T8 0.10 OLJFJH_12010 outer membrane assembly protein AsmA 0.69 OLJFJH_13820 ATP-dependent RNA helicase HrpA low > 58
Pseudomonas syringae pv. syringae B728a ΔmexB 0.10 Psyr_4900 AsmA 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a 0.10 Psyr_4900 AsmA 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_3845 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.45 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 103
Pseudomonas fluorescens FW300-N1B4 0.10 Pf1N1B4_1630 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.45 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas sp. RS175 0.10 PFR28_04926 hypothetical protein 0.44 PFR28_00739 hypothetical protein low > 88
Dickeya dianthicola 67-19 0.09 HGI48_RS06715 outer membrane assembly protein AsmA 0.69 HGI48_RS12360 ATP-dependent RNA helicase HrpA low > 71
Dickeya dianthicola ME23 0.09 DZA65_RS07070 outer membrane assembly protein AsmA 0.69 DZA65_RS12800 ATP-dependent RNA helicase HrpA low > 75
Pseudomonas aeruginosa PA14 0.09 IKLFDK_27765 AsmA family protein 0.45 IKLFDK_16885 ATP-dependent RNA helicase HrpA low > 98
Dickeya dadantii 3937 0.09 DDA3937_RS06700 outer membrane assembly protein AsmA 0.69 DDA3937_RS12270 ATP-dependent RNA helicase HrpA low > 74
Pseudomonas sp. DMC3 0.09 GFF4101 hypothetical protein 0.45 GFF2341 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.09 PfGW456L13_365 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.45 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas lactucae CFBP13502 0.09 GEMAOFIL_00530 hypothetical protein 0.45 GEMAOFIL_04265 hypothetical protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.09 AO356_09825 cell envelope biogenesis protein AsmA 0.45 AO356_04280 ATP-dependent RNA helicase HrpA low > 104
Pseudomonas putida KT2440 0.09 PP_0287 conserved exported protein of unknown function 0.44 PP_4546 ATP-dependent helicase HrpA low > 96
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS01595 AsmA family protein 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens SBW25 0.09 PFLU_RS01595 AsmA family protein 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas simiae WCS417 0.09 PS417_01550 cell envelope biogenesis protein AsmA 0.44 PS417_20575 ATP-dependent helicase HrpA low > 88
Pseudomonas sp. SVBP6 0.09 COO64_RS00240 AsmA family protein 0.45 COO64_RS22000 hrpA ATP-dependent RNA helicase HrpA low > 93
Pseudomonas sp. BP01 0.09 JOY50_RS25490 AsmA family protein 0.44 JOY50_RS01295 hrpA ATP-dependent RNA helicase HrpA low > 84
Pseudomonas fluorescens FW300-N2E3 0.08 AO353_12055 cell envelope biogenesis protein AsmA 0.45 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas aeruginosa PUPa3 0.08 DQ20_RS50530 AsmA family protein 0.45 DQ20_RS40625 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 101
Pseudomonas aeruginosa MRSN321 0.08 DY961_RS11570 AsmA family protein 0.45 DY961_RS00395 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 100

Not shown: 2 genomes with orthologs for CSW01_05285 only; 32 genomes with orthologs for CSW01_06950 only