Conservation of cofitness between CSW01_06260 and CSW01_06855 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.0 CSW01_06855 amino acid ABC transporter substrate-binding protein 0.55 10
Rhodopseudomonas palustris CGA009 0.35 TX73_010790 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.62 TX73_013240 amino acid ABC transporter substrate-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.62 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.62 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family
Pseudomonas aeruginosa PA14 0.32 IKLFDK_06065 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 IKLFDK_19875 amino acid ABC transporter substrate-binding protein 0.21 97
Pseudomonas putida KT2440 0.32 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.60 PP_1297 putative amino-acid ABC transporter-binding protein YhdW low > 96
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS46765 cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 DQ20_RS48870 amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas sp. RS175 0.31 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 PFR28_03542 Putative amino-acid ABC transporter-binding protein YhdW low > 88
Variovorax sp. OAS795 0.31 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.55 ABID97_RS13290 amino acid ABC transporter substrate-binding protein
Variovorax sp. SCN45 0.31 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.54 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS06015 cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 DY961_RS13580 amino acid ABC transporter substrate-binding protein low > 100
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_4236 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.60 PfGW456L13_1698 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 AO353_04615 amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.58 Pf1N1B4_917 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 87
Pseudomonas stutzeri RCH2 0.31 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.65 Psest_3163 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 67
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 AO356_17380 amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas sp. S08-1 0.30 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 OH686_17805 Amino acid ABC transporter, substrate-binding protein YhdW low > 80
Pseudomonas sp. BP01 0.30 JOY50_RS27975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 JOY50_RS15305 amino acid ABC transporter substrate-binding protein low > 84
Pseudomonas orientalis W4I3 0.30 QF045_RS22145 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 QF045_RS07885 amino acid ABC transporter substrate-binding protein low > 93
Pseudomonas segetis P6 0.30 ACVTMO_RS09055 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.66 ACVTMO_RS17560 amino acid ABC transporter substrate-binding protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.59 Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data)
Azospirillum brasilense Sp245 0.28 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 AZOBR_RS08655 amino acid ABC transporter substrate-binding protein
Pseudomonas sp. SVBP6 0.27 COO64_RS07215 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.61 COO64_RS11695 amino acid ABC transporter substrate-binding protein low > 93
Azospirillum sp. SherDot2 0.27 MPMX19_00312 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.60 MPMX19_01338 Putative amino-acid ABC transporter-binding protein YhdW
Xanthobacter sp. DMC5 0.27 GFF3391 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.59 GFF1019 Putative amino-acid ABC transporter-binding protein YhdW
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 PFLU_RS25160 amino acid ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 PFLU_RS25160 amino acid ABC transporter substrate-binding protein low > 109
Pseudomonas sp. DMC3 0.26 GFF2554 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 GFF1934 Putative amino-acid ABC transporter-binding protein YhdW low > 89
Bosea sp. OAE506 0.26 ABIE41_RS21245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.62 ABIE41_RS16030 amino acid ABC transporter substrate-binding protein
Rhizobium sp. OAE497 0.26 ABIE40_RS10720 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 ABIE40_RS08815 amino acid ABC transporter substrate-binding protein low > 107
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_04203 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 GEMAOFIL_04817 Putative amino-acid ABC transporter-binding protein YhdW low > 96
Pseudomonas simiae WCS417 0.24 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 PS417_23345 amino acid ABC transporter substrate-binding protein low > 88
Escherichia coli ECRC101 0.24 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 MCAODC_08155 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 87
Escherichia coli ECRC98 0.24 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 JDDGAC_21260 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 87
Escherichia coli ECRC102 0.24 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 NIAGMN_15395 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 80
Escherichia coli ECRC100 0.24 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 OKFHMN_17635 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 79
Escherichia coli ECRC99 0.24 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 KEDOAH_10515 yhdW Putative amino-acid ABC transporter-binding protein YhdW
Escherichia coli ECRC62 0.24 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 BNILDI_02095 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 75
Sinorhizobium meliloti 1021 0.24 SMc04214 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.65 SMc02118 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data)
Escherichia coli BL21 0.24 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.56 ECD_03126 putative amino-acid transporter subunit low > 61
Escherichia fergusonii Becca 0.24 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 EFB2_00555 Putative amino-acid ABC transporter-binding protein YhdW low > 86
Escherichia coli ECOR38 0.24 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 HEPCGN_16455 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 88
Escherichia coli Nissle 1917 0.24 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 ECOLIN_RS18775 amino acid ABC transporter substrate-binding protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 OHPLBJKB_00436 Putative amino-acid ABC transporter-binding protein YhdW low > 74
Escherichia coli ECOR27 0.24 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 NOLOHH_09425 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 76
Rahnella sp. WP5 0.24 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.60 EX31_RS12155 amino acid ABC transporter substrate-binding protein low > 89
Dinoroseobacter shibae DFL-12 0.24 Dshi_0788 Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) 0.50 Dshi_0318 cationic amino acid ABC transporter, periplasmic binding protein (RefSeq)
Phaeobacter inhibens DSM 17395 0.23 PGA1_c07570 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT 0.52 PGA1_c01980 glutamate/glutamine/aspartate/asparagine-binding protein BztA
Agrobacterium fabrum C58 0.22 Atu1890 cobyrinic acid synthase 0.64 Atu1577 ABC transporter, substrate binding protein (amino acid)
Rhodospirillum rubrum S1H 0.20 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.68 Rru_A1004 Lysine-arginine-ornithine-binding periplasmic protein (NCBI) low > 58

Not shown: 43 genomes with orthologs for CSW01_06260 only; 15 genomes with orthologs for CSW01_06855 only