Conservation of cofitness between CSW01_12685 and CSW01_05940 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12685 DNA polymerase III subunit chi 1.0 CSW01_05940 anthranilate phosphoribosyltransferase 0.71 1
Shewanella oneidensis MR-1 0.35 SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) 0.49 SO3021 trpD anthranilate phosphoribosyltransferase (NCBI ptt file) low > 76
Rahnella sp. WP5 0.35 EX31_RS04390 DNA polymerase III subunit chi 0.66 EX31_RS09965 anthranilate phosphoribosyltransferase low > 89
Dickeya dadantii 3937 0.35 DDA3937_RS01990 DNA polymerase III subunit chi 0.63 DDA3937_RS10475 anthranilate phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.35 Shewana3_1132 DNA polymerase III chi subunit, HolC (RefSeq) 0.48 Shewana3_1518 trpD anthranilate phosphoribosyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.35 Shew_0924 DNA polymerase III chi subunit, HolC (RefSeq) 0.50 Shew_2253 anthranilate phosphoribosyltransferase (RefSeq) — —
Erwinia tracheiphila HP pepo 2.2 0.34 IJEDHG_14165 holC DNA polymerase III subunit chi 0.61 IJEDHG_23500 Anthranilate phosphoribosyltransferase — —
Dickeya dianthicola ME23 0.34 DZA65_RS02055 DNA polymerase III subunit chi 0.63 DZA65_RS10955 anthranilate phosphoribosyltransferase — —
Pantoea sp. MT58 0.33 IAI47_16800 DNA polymerase III subunit chi 0.63 IAI47_09180 anthranilate phosphoribosyltransferase — —
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS08915 DNA polymerase III subunit chi 0.66 PagCFBP13505_RS07005 anthranilate phosphoribosyltransferase — —
Serratia liquefaciens MT49 0.32 IAI46_02355 DNA polymerase III subunit chi 0.60 IAI46_14030 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.32 HGI48_RS01950 DNA polymerase III subunit chi 0.63 HGI48_RS10475 anthranilate phosphoribosyltransferase — —
Erwinia amylovora T8 0.32 OLJFJH_07375 DNA polymerase III subunit chi 0.65 OLJFJH_13485 Anthranilate phosphoribosyltransferase — —
Shewanella amazonensis SB2B 0.30 Sama_0791 DNA polymerase III, chi subunit (RefSeq) 0.48 Sama_2131 trpD anthranilate phosphoribosyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_03196 DNA polymerase III subunit chi 0.54 MIT1002_01428 Anthranilate synthase component II — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1166 DNA polymerase III, chi subunit (EC 2.7.7.7) 0.46 B158DRAFT_2427 anthranilate phosphoribosyltransferase low > 40
Pseudomonas aeruginosa PA14 0.23 IKLFDK_19735 DNA polymerase III subunit chi 0.28 IKLFDK_22175 Anthranilate phosphoribosyltransferase low > 100
Pseudomonas sp. BP01 0.22 JOY50_RS11260 DNA polymerase III subunit chi 0.30 JOY50_RS18235 trpD anthranilate phosphoribosyltransferase low > 84
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_04540 DNA polymerase III subunit chi 0.26 AO353_07215 anthranilate phosphoribosyltransferase — —
Pseudomonas sp. RS175 0.21 PFR28_03529 DNA polymerase III subunit chi 0.26 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.21 COO64_RS04410 DNA polymerase III subunit chi 0.28 COO64_RS22415 trpD anthranilate phosphoribosyltransferase low > 93
Pseudomonas simiae WCS417 0.21 PS417_05160 DNA polymerase III subunit chi 0.26 PS417_25715 anthranilate phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS05230 DNA polymerase III subunit chi 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS05230 DNA polymerase III subunit chi 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase low > 109
Pseudomonas lactucae CFBP13502 0.20 GEMAOFIL_01238 DNA polymerase III subunit chi 0.26 GEMAOFIL_05263 Anthranilate phosphoribosyltransferase low > 93
Pseudomonas putida KT2440 0.20 PP_0979 DNA polymerase III subunit chi 0.31 PP_0421 Anthranilate phosphoribosyltransferase low > 96
Pseudomonas stutzeri RCH2 0.20 Psest_1234 DNA polymerase III, chi subunit 0.33 Psest_3648 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_5419 DNA polymerase III chi subunit (EC 2.7.7.7) 0.26 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 103
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_899 DNA polymerase III chi subunit (EC 2.7.7.7) 0.26 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 87
Pseudomonas sp. DMC3 0.20 GFF1951 DNA polymerase III subunit chi 0.26 GFF17 Anthranilate phosphoribosyltransferase low > 89
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_4847 DNA polymerase III chi subunit (EC 2.7.7.7) 0.26 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 87
Acinetobacter radioresistens SK82 0.20 MPMX26_00156 hypothetical protein 0.33 MPMX26_00984 Anthranilate phosphoribosyltransferase low > 36
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_17465 DNA polymerase III subunit chi 0.25 AO356_14435 anthranilate phosphoribosyltransferase low > 104
Lysobacter sp. OAE881 0.18 ABIE51_RS04470 DNA polymerase III subunit chi 0.30 ABIE51_RS04180 anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_1090 DNA polymerase III, chi subunit 0.30 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_1090 DNA polymerase III, chi subunit 0.30 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Acinetobacter baumannii LAC-4 0.18 RR41_RS17830 DNA polymerase III subunit chi 0.33 RR41_RS05610 anthranilate phosphoribosyltransferase 0.49 12
Pseudomonas segetis P6 0.17 MPMX49_03517 DNA polymerase III subunit chi 0.31 MPMX49_00891 Anthranilate phosphoribosyltransferase — —

Not shown: 21 genomes with orthologs for CSW01_12685 only; 58 genomes with orthologs for CSW01_05940 only