| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_08810 | | efflux RND transporter periplasmic adaptor subunit | 1.0 | CSW01_05825 | | transcriptional regulator HexR | 0.59 | 4 |
| Shewanella amazonensis SB2B | 0.38 | Sama_1715 | | acriflavin resistance periplasmic protein (RefSeq) | 0.77 | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.22 | Shewana3_3571 | | RND family efflux transporter MFP subunit (RefSeq) | 0.77 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.21 | Shew_0467 | | RND family efflux transporter MFP subunit (RefSeq) | 0.78 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 60 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_06745 | | Multidrug efflux system, membrane fusion component | 0.58 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | low | > 80 |
| Pseudomonas sp. RS175 | 0.18 | PFR28_00378 | | Multidrug resistance protein MdtA | 0.57 | PFR28_00572 | | HTH-type transcriptional regulator HexR | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.18 | Psest_0734 | | RND family efflux transporter, MFP subunit | 0.57 | Psest_0851 | | Transcriptional regulators | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.18 | AO356_06135 | | RND transporter | 0.57 | AO356_05165 | | transcriptional regulator | low | > 104 |
| Pseudomonas simiae WCS417 | 0.18 | PS417_06110 | | RND transporter | 0.57 | PS417_22115 | | transcriptional regulator | low | > 88 |
| Alteromonas macleodii MIT1002 | 0.18 | MIT1002_01360 | | Toluene efflux pump periplasmic linker protein TtgG precursor | 0.73 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.18 | Pf6N2E2_3092 | | RND efflux membrane fusion protein | 0.57 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.18 | Pf1N1B4_3062 | | RND efflux membrane fusion protein | 0.57 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.18 | PFLU_RS06180 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.18 | PFLU_RS06180 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.18 | PfGW456L13_4731 | | RND efflux membrane fusion protein | 0.57 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_16360 | | RND transporter | 0.57 | AO353_03365 | | transcriptional regulator | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.17 | GEMAOFIL_01392 | | Multidrug resistance protein MdtA | 0.57 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.17 | COO64_RS19545 | | efflux RND transporter periplasmic adaptor subunit | 0.58 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | low | > 93 |
| Pseudomonas orientalis W4I3 | 0.17 | QF045_RS08960 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | low | > 93 |
| Pseudomonas sp. DMC3 | 0.17 | GFF2033 | | Multidrug resistance protein MdtA | 0.58 | GFF5141 | | HTH-type transcriptional regulator HexR | low | > 89 |
| Pseudomonas aeruginosa MRSN321 | 0.17 | DY961_RS14590 | mexJ;inference=COORDINATES | multidrug efflux RND transporter periplasmic adaptor subunit MexJ | 0.55 | DY961_RS01015 | | MurR/RpiR family transcriptional regulator | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.17 | DQ20_RS42535 | mexJ;inference=COORDINATES | multidrug efflux RND transporter periplasmic adaptor subunit MexJ | 0.55 | DQ20_RS34520 | | MurR/RpiR family transcriptional regulator | low | > 101 |
| Pseudomonas segetis P6 | 0.17 | MPMX49_01633 | | Multidrug resistance protein MdtA | 0.57 | MPMX49_02832 | | HTH-type transcriptional regulator HexR | low | > 75 |
| Pseudomonas sp. BP01 | 0.17 | JOY50_RS26095 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | low | > 84 |
| Pseudomonas aeruginosa PA14 | 0.16 | IKLFDK_18775 | | multidrug efflux RND transporter periplasmic adaptor subunit MexJ | 0.55 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | low | > 98 |
| Pseudomonas putida KT2440 | 0.16 | PP_1516 | | RND membrane fusion protein | 0.57 | PP_1021 | | DNA-binding transcriptional regulator | low | > 96 |
| Paraburkholderia sabiae LMG 24235 | 0.16 | QEN71_RS07195 | | efflux RND transporter periplasmic adaptor subunit | 0.30 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.15 | H281DRAFT_05198 | | RND family efflux transporter, MFP subunit | 0.33 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.15 | ABIE53_002353 | | multidrug efflux system membrane fusion protein | 0.35 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | low | > 113 |
| Phaeobacter inhibens DSM 17395 | 0.15 | PGA1_c24620 | | putative secretion protein | 0.10 | PGA1_c27130 | | putative HTH-type transcriptional regulator | low | > 62 |
| Azospirillum sp. SherDot2 | 0.15 | MPMX19_05261 | | Multidrug resistance protein MdtE | 0.33 | MPMX19_05117 | | HTH-type transcriptional regulator HexR | low | > 112 |
| Burkholderia phytofirmans PsJN | 0.15 | BPHYT_RS11370 | | RND transporter MFP subunit | 0.34 | BPHYT_RS16740 | | transcriptional regulator | low | > 109 |
| Serratia liquefaciens MT49 | 0.15 | IAI46_13380 | | efflux RND transporter periplasmic adaptor subunit | 0.78 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.14 | RR42_RS24665 | | hypothetical protein | 0.34 | RR42_RS06120 | | transcriptional regulator | low | > 128 |
| Dickeya dianthicola ME23 | 0.13 | DZA65_RS08245 | | efflux RND transporter periplasmic adaptor subunit | 0.75 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.13 | GFF4247 | | RND efflux system, membrane fusion protein CmeA | 0.72 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | low | > 78 |
| Pantoea sp. MT58 | 0.12 | IAI47_21720 | | efflux RND transporter periplasmic adaptor subunit | 0.63 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.11 | RPSI07_RS02510 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | low | > 81 |
Not shown: 17 genomes with orthologs for CSW01_08810 only; 42 genomes with orthologs for CSW01_05825 only