Conservation of cofitness between CSW01_06560 and CSW01_05070 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06560 6-carboxytetrahydropterin synthase QueD 1.0 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.55 10
Erwinia amylovora T8 0.86 OLJFJH_09295 6-carboxytetrahydropterin synthase QueD 0.61 OLJFJH_17090 N-acetylglucosamine-6-phosphate deacetylase low > 58
Escherichia coli ECOR38 0.85 HEPCGN_19100 queD 6-carboxytetrahydropterin synthase QueD 0.63 HEPCGN_01065 nagA N-acetylglucosamine-6-phosphate deacetylase low > 88
Enterobacter sp. TBS_079 0.85 MPMX20_03644 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.63 MPMX20_01323 N-acetylglucosamine-6-phosphate deacetylase low > 85
Klebsiella pneumoniae MKP103 0.85 KDGMDA_03305 6-carboxytetrahydropterin synthase QueD 0.65 KDGMDA_16555 N-acetylglucosamine-6-phosphate deacetylase low > 95
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2854 queuosine biosynthesis protein QueD 0.64 EX28DRAFT_2298 N-acetylglucosamine-6-phosphate deacetylase low > 76
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS16820 6-carboxytetrahydropterin synthase QueD 0.64 PagCFBP13505_RS03420 N-acetylglucosamine-6-phosphate deacetylase low > 74
Klebsiella michiganensis M5al 0.85 BWI76_RS22775 6-carboxytetrahydropterin synthase QueD 0.64 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Pantoea sp. MT58 0.84 IAI47_04145 6-carboxytetrahydropterin synthase QueD 0.64 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Dickeya dianthicola 67-19 0.84 HGI48_RS17030 6-carboxytetrahydropterin synthase QueD 0.63 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Escherichia fergusonii Becca 0.84 EFB2_01152 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.63 EFB2_03426 N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli ECOR27 0.84 NOLOHH_12180 queD 6-carboxytetrahydropterin synthase QueD 0.63 NOLOHH_23545 nagA N-acetylglucosamine-6-phosphate deacetylase low > 76
Escherichia coli ECRC98 0.84 JDDGAC_24030 queD 6-carboxytetrahydropterin synthase QueD 0.63 JDDGAC_10815 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECRC102 0.84 NIAGMN_18135 queD 6-carboxytetrahydropterin synthase QueD 0.63 NIAGMN_05220 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia coli ECRC101 0.84 MCAODC_10890 queD 6-carboxytetrahydropterin synthase QueD 0.63 MCAODC_26380 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli BL21 0.84 ECD_02610 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 0.63 ECD_00634 N-acetylglucosamine-6-phosphate deacetylase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00968 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.63 OHPLBJKB_03038 N-acetylglucosamine-6-phosphate deacetylase low > 74
Escherichia coli ECRC62 0.84 BNILDI_10730 queD 6-carboxytetrahydropterin synthase QueD 0.63 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli ECRC100 0.84 OKFHMN_20365 queD 6-carboxytetrahydropterin synthase QueD 0.63 OKFHMN_07165 nagA N-acetylglucosamine-6-phosphate deacetylase low > 79
Escherichia coli ECRC99 0.84 KEDOAH_07760 queD 6-carboxytetrahydropterin synthase QueD 0.63 KEDOAH_20805 nagA N-acetylglucosamine-6-phosphate deacetylase
Escherichia coli BW25113 0.84 b2765 ygcM 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) 0.63 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Erwinia tracheiphila HP pepo 2.2 0.83 IJEDHG_17415 queD 6-carboxytetrahydropterin synthase QueD 0.61 IJEDHG_02305 nagA N-acetylglucosamine-6-phosphate deacetylase
Erwinia tracheiphila SCR3 0.83 LU632_RS06395 queD 6-carboxytetrahydropterin synthase QueD 0.61 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase low > 73
Dickeya dadantii 3937 0.83 DDA3937_RS16965 6-carboxytetrahydropterin synthase QueD 0.64 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Escherichia coli Nissle 1917 0.83 ECOLIN_RS15415 6-carboxytetrahydropterin synthase QueD 0.63 ECOLIN_RS03615 N-acetylglucosamine-6-phosphate deacetylase low > 55
Dickeya dianthicola ME23 0.83 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD 0.63 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase low > 75
Rahnella sp. WP5 0.81 EX31_RS07915 6-carboxytetrahydropterin synthase QueD 0.67 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89
Pectobacterium carotovorum WPP14 0.80 HER17_RS04205 6-carboxytetrahydropterin synthase QueD 0.64 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Serratia liquefaciens MT49 0.79 IAI46_03680 6-carboxytetrahydropterin synthase QueD 0.65 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 87
Lysobacter sp. OAE881 0.75 ABIE51_RS17950 6-carboxytetrahydropterin synthase QueD 0.39 ABIE51_RS01635 N-acetylglucosamine-6-phosphate deacetylase low > 62
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_21260 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.18 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2447 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I 0.20 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 87
Pseudomonas sp. SVBP6 0.72 COO64_RS17240 queD 6-carboxytetrahydropterin synthase QueD 0.20 COO64_RS04730 nagA N-acetylglucosamine-6-phosphate deacetylase low > 93
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.4528.1 hypothetical protein 0.34 Xcc-8004.957.1 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 0.56 2
Rhodanobacter denitrificans MT42 0.66 LRK55_RS09085 6-carboxytetrahydropterin synthase QueD 0.35 LRK55_RS07585 N-acetylglucosamine-6-phosphate deacetylase
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_15925 queD 6-carboxytetrahydropterin synthase QueD 0.35 OKGIIK_14345 nagA N-acetylglucosamine-6-phosphate deacetylase low > 53
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09655 6-carboxytetrahydropterin synthase QueD 0.35 LRK54_RS07855 N-acetylglucosamine-6-phosphate deacetylase
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS13650 6-carboxytetrahydropterin synthase QueD 0.34 ABZR86_RS16045 N-acetylglucosamine-6-phosphate deacetylase low > 74
Rhodanobacter sp000427505 FW510-R12 0.64 LRK53_RS02150 6-carboxytetrahydropterin synthase QueD 0.37 LRK53_RS00690 N-acetylglucosamine-6-phosphate deacetylase low > 59
Agrobacterium fabrum C58 0.34 Atu3345 6-pyruvoyl tetrahydrobiopterin synthase 0.31 Atu2608 N-acetylglucosamine-6-phosphate deacetylase low > 89
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03260 queuosine biosynthesis protein QueD 0.35 CCNA_00452 N-acetylglucosamine-6-phosphate deacetylase low > 67
Sinorhizobium meliloti 1021 0.32 SM_b20939 6-pyruvoyl-tetrahydropterin synthase 0.32 SMc02878 N-acetylglucosamine-6-phosphate deacetylase
Caulobacter crescentus NA1000 0.32 CCNA_03260 queuosine biosynthesis protein QueD 0.35 CCNA_00452 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 66
Phaeobacter inhibens DSM 17395 0.27 PGA1_c05610 putative queuosine biosynthesis protein QueD 0.32 PGA1_c27880 N-acetylglucosamine-6-phosphate deacetylase NagA
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS10595 6-carboxytetrahydropterin synthase QueD 0.23 ABI39_RS00260 N-acetylglucosamine-6-phosphate deacetylase low > 72
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS14875 6-carboxytetrahydropterin synthase QueD 0.23 HMPREF1058_RS07745 N-acetylglucosamine-6-phosphate deacetylase low > 67
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS13890 6-carboxytetrahydropterin synthase QueD 0.21 HMPREF1181_RS12440 N-acetylglucosamine-6-phosphate deacetylase low > 56
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS00755 6-carboxytetrahydropterin synthase QueD 0.22 HMPREF1078_RS15565 N-acetylglucosamine-6-phosphate deacetylase

Not shown: 31 genomes with orthologs for CSW01_06560 only; 21 genomes with orthologs for CSW01_05070 only