Conservation of cofitness between CSW01_04785 and CSW01_03755 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04785 undecaprenyl-phosphate glucose phosphotransferase 1.0 CSW01_03755 recombination-associated protein RdgC 0.49 14
Alteromonas macleodii MIT1002 0.50 MIT1002_01608 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase 0.37 MIT1002_00749 Recombination-associated protein RdgC low > 70
Escherichia coli BW25113 0.43 b2047 wcaJ predicted UDP-glucose lipid carrier transferase (NCBI) 0.57 b0393 rdgC recombination associated protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS12065 undecaprenyl-phosphate glucose phosphotransferase 0.57 ECOLIN_RS02385 recombination-associated protein RdgC low > 55
Escherichia coli BL21 0.43 ECD_01953 colanic biosynthesis UDP-glucose lipid carrier transferase 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function low > 61
Escherichia coli ECOR27 0.43 NOLOHH_15705 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC low > 76
Escherichia fergusonii Becca 0.43 EFB2_01807 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase 0.57 EFB2_03663 Recombination-associated protein RdgC low > 86
Escherichia coli ECRC62 0.43 BNILDI_14620 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC low > 75
Escherichia coli ECOR38 0.43 HEPCGN_03075 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC low > 88
Escherichia coli ECRC100 0.43 OKFHMN_24375 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC low > 79
Escherichia coli ECRC101 0.43 MCAODC_20565 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC low > 87
Escherichia coli ECRC99 0.43 KEDOAH_03775 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC98 0.43 JDDGAC_28485 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC low > 87
Dickeya dianthicola ME23 0.43 DZA65_RS02705 undecaprenyl-phosphate glucose phosphotransferase 0.59 DZA65_RS05790 recombination-associated protein RdgC low > 75
Escherichia coli ECRC102 0.43 NIAGMN_22320 wcaJ undecaprenyl-phosphate glucose phosphotransferase 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC low > 80
Klebsiella michiganensis M5al 0.42 BWI76_RS05615 undecaprenyl-phosphate glucose phosphotransferase 0.57 BWI76_RS06205 recombination-associated protein RdgC low > 92
Dickeya dadantii 3937 0.42 DDA3937_RS02565 undecaprenyl-phosphate glucose phosphotransferase 0.58 DDA3937_RS05405 recombination-associated protein RdgC low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS02595 undecaprenyl-phosphate glucose phosphotransferase 0.59 HGI48_RS05465 recombination-associated protein RdgC — —
Pectobacterium carotovorum WPP14 0.42 HER17_RS16825 undecaprenyl-phosphate glucose phosphotransferase 0.55 HER17_RS16060 recombination-associated protein RdgC low > 75
Enterobacter sp. TBS_079 0.42 MPMX20_03029 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase 0.56 MPMX20_00982 Recombination-associated protein RdgC low > 85
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0508 Undecaprenyl-phosphate glucose phosphotransferase 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3881 Colanic acid biosynthsis UDP-glucose lipid carrier transferase WcaJ 0.57 GFF4290 DNA recombination-dependent growth factor C low > 78
Serratia liquefaciens MT49 0.40 IAI46_08080 undecaprenyl-phosphate glucose phosphotransferase 0.58 IAI46_04710 recombination-associated protein RdgC low > 87
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS09935 UDP-phosphate glucose phosphotransferase 0.34 HSERO_RS21640 recombinase RdgC low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3231 sugar transferase 0.43 Psyr_1588 Putative exonuclease, RdgC low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3231 sugar transferase 0.43 Psyr_1588 Putative exonuclease, RdgC low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF88 capsular polysaccharide biosynthesis protein 0.27 GFF5355 DNA recombination-dependent growth factor C — —
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2082.1 Xanthan biosynthesis glycosyltransferase GumD 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C — —
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS33195 UDP-sugar lipid carrier transferase 0.28 RR42_RS17820 recombinase RdgC low > 128
Pseudomonas sp. SVBP6 0.33 COO64_RS06685 undecaprenyl-phosphate glucose phosphotransferase 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC low > 93
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS39765 undecaprenyl-phosphate glucose phosphotransferase 0.44 DQ20_RS40455 rdgC;inference=COORDINATES recombination-associated protein RdgC low > 101
Pseudomonas aeruginosa MRSN321 0.32 DY961_RS17535 undecaprenyl-phosphate glucose phosphotransferase 0.44 DY961_RS00580 rdgC;inference=COORDINATES recombination-associated protein RdgC low > 100
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS21740 undecaprenyl-phosphate glucose phosphotransferase 0.29 QEN71_RS20685 recombination-associated protein RdgC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_00944 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase 0.29 H281DRAFT_00319 recombination associated protein RdgC low > 103
Pseudomonas fluorescens SBW25 0.31 PFLU_RS10260 undecaprenyl-phosphate glucose phosphotransferase 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS10260 undecaprenyl-phosphate glucose phosphotransferase 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS08485 undecaprenyl-phosphate glucose phosphotransferase 0.29 BPHYT_RS06215 recombinase RdgC 0.17 87
Pseudomonas putida KT2440 0.30 PP_3142 putative Sugar transferase 0.43 PP_1702 Recombination-associated protein RdgC low > 96
Paraburkholderia graminis OAS925 0.30 ABIE53_002180 putative colanic acid biosynthesis UDP-glucose lipid carrier transferase 0.29 ABIE53_001446 recombination associated protein RdgC low > 113
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3991 Capsular polysaccharide biosynthesis protein 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C low > 87
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_5927 Capsular polysaccharide biosynthesis protein 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Pseudomonas sp. BP01 0.30 JOY50_RS21585 undecaprenyl-phosphate glucose phosphotransferase 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC low > 84
Pseudomonas simiae WCS417 0.29 PS417_09640 capsular biosynthesis protein 0.40 PS417_09245 recombinase RdgC low > 88
Pseudomonas sp. DMC3 0.29 GFF1322 hypothetical protein 0.41 GFF2574 Recombination-associated protein RdgC low > 89
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_21240 undecaprenyl-phosphate glucose phosphotransferase 0.42 AO353_02515 recombination-associated protein RdgC low > 101
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_02624 hypothetical protein 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC low > 96
Pseudomonas sp. S08-1 0.22 OH686_22765 hypothetical protein 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC low > 80
Rhodanobacter sp000427505 FW510-R12 0.15 LRK53_RS15440 TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase 0.30 LRK53_RS03480 recombination-associated protein RdgC — —
Pantoea agglomerans CFBP13505 P0401 0.15 PagCFBP13505_RS01035 undecaprenyl-phosphate galactose phosphotransferase WbaP 0.57 PagCFBP13505_RS10255 recombination-associated protein RdgC low > 74
Pantoea sp. MT58 0.15 IAI47_06925 undecaprenyl-phosphate galactose phosphotransferase WbaP 0.58 IAI47_14910 recombination-associated protein RdgC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_01652 hypothetical protein 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC low > 74
Rahnella sp. WP5 0.15 EX31_RS02940 undecaprenyl-phosphate galactose phosphotransferase WbaP 0.58 EX31_RS21990 recombination-associated protein RdgC low > 89
Erwinia amylovora T8 0.15 OLJFJH_12020 UDP-galactose-lipid carrier transferase 0.58 OLJFJH_18235 recombination-associated protein RdgC low > 58
Klebsiella pneumoniae MKP103 0.14 KDGMDA_26215 UDP-phosphate galactose phosphotransferase 0.58 KDGMDA_14285 recombination-associated protein RdgC low > 95
Erwinia tracheiphila SCR3 0.13 LU632_RS08765 wbaP undecaprenyl-phosphate galactose phosphotransferase WbaP 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC low > 73
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_18870 wbaP UDP-phosphate galactose phosphotransferase 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC low > 61

Not shown: 12 genomes with orthologs for CSW01_04785 only; 26 genomes with orthologs for CSW01_03755 only