Conservation of cofitness between CSW01_00395 and CSW01_03650 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00395 ribosomal RNA small subunit methyltransferase J 1.0 CSW01_03650 energy-dependent translational throttle protein EttA 0.71 9
Shewanella amazonensis SB2B 0.61 Sama_3564 hypothetical protein (RefSeq) 0.84 Sama_1013 putative ABC transporter ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.60 Shewana3_4037 hypothetical protein (RefSeq) 0.85 Shewana3_1093 putative ABC transporter ATP-binding protein (RefSeq) low > 73
Shewanella loihica PV-4 0.58 Shew_3647 hypothetical protein (RefSeq) 0.83 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) 0.44 26
Rahnella sp. WP5 0.56 EX31_RS05160 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 EX31_RS04000 energy-dependent translational throttle protein EttA low > 89
Serratia liquefaciens MT49 0.56 IAI46_24205 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 IAI46_02965 energy-dependent translational throttle protein EttA low > 87
Klebsiella pneumoniae MKP103 0.55 KDGMDA_07420 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 KDGMDA_12445 energy-dependent translational throttle protein EttA low > 95
Escherichia coli BW25113 0.55 b3497 yhiQ predicted SAM-dependent methyltransferase (NCBI) 0.81 b4391 yjjK fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) low > 76
Escherichia coli BL21 0.55 ECD_03346 16S rRNA m(2)G1516 methyltransferase, SAM-dependent 0.81 ECD_04267 energy-dependent translational throttle A low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00206 Ribosomal RNA small subunit methyltransferase J 0.81 OHPLBJKB_03670 Energy-dependent translational throttle protein EttA low > 74
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19980 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 ECOLIN_RS25205 energy-dependent translational throttle protein EttA low > 55
Escherichia fergusonii Becca 0.55 EFB2_00318 Ribosomal RNA small subunit methyltransferase J 0.81 EFB2_04053 Energy-dependent translational throttle protein EttA 0.49 56
Escherichia coli ECRC101 0.55 MCAODC_06935 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 MCAODC_01690 ettA energy-dependent translational throttle protein EttA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF518 rRNA small subunit methyltransferase J 0.81 GFF1059 ABC transporter, ATP-binding protein low > 78
Escherichia coli ECOR38 0.55 HEPCGN_15330 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 HEPCGN_09180 ettA energy-dependent translational throttle protein EttA low > 88
Escherichia coli ECRC98 0.55 JDDGAC_20050 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 JDDGAC_14770 ettA energy-dependent translational throttle protein EttA low > 87
Escherichia coli ECRC100 0.55 OKFHMN_16420 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 OKFHMN_11175 ettA energy-dependent translational throttle protein EttA low > 79
Escherichia coli ECRC99 0.55 KEDOAH_11725 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 KEDOAH_16980 ettA energy-dependent translational throttle protein EttA — —
Escherichia coli ECRC102 0.55 NIAGMN_14185 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 NIAGMN_09025 ettA energy-dependent translational throttle protein EttA low > 80
Escherichia coli ECOR27 0.55 NOLOHH_08355 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.80 NOLOHH_03505 ettA energy-dependent translational throttle protein EttA low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4064 Putative SAM-dependent methyltransferase 0.81 EX28DRAFT_3601 ATP-binding cassette protein, ChvD family low > 76
Escherichia coli ECRC62 0.55 BNILDI_03205 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 BNILDI_08090 ettA energy-dependent translational throttle protein EttA low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS21270 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.82 DDA3937_RS18460 energy-dependent translational throttle protein EttA low > 74
Erwinia amylovora T8 0.54 OLJFJH_04525 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 OLJFJH_01555 energy-dependent translational throttle protein EttA low > 58
Pectobacterium carotovorum WPP14 0.54 HER17_RS21305 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.82 HER17_RS02745 energy-dependent translational throttle protein EttA low > 75
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_12595 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.80 IJEDHG_06350 ettA energy-dependent translational throttle protein EttA low > 61
Erwinia tracheiphila SCR3 0.53 LU632_RS19465 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.80 LU632_RS02565 ettA energy-dependent translational throttle protein EttA low > 73
Enterobacter sp. TBS_079 0.53 MPMX20_04396 Ribosomal RNA small subunit methyltransferase J 0.81 MPMX20_00698 Energy-dependent translational throttle protein EttA low > 85
Pantoea sp. MT58 0.52 IAI47_01350 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 IAI47_16325 energy-dependent translational throttle protein EttA low > 76
Pantoea agglomerans CFBP13505 P0401 0.52 PagCFBP13505_RS17850 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.81 PagCFBP13505_RS21780 energy-dependent translational throttle protein EttA low > 74
Klebsiella michiganensis M5al 0.50 BWI76_RS26605 16S rRNA (guanine(1516)-N(2))-methyltransferase 0.81 BWI76_RS04175 energy-dependent translational throttle protein EttA low > 92
Dickeya dianthicola ME23 0.50 DZA65_RS00030 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.82 DZA65_RS19530 energy-dependent translational throttle protein EttA low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS00040 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.82 HGI48_RS18390 energy-dependent translational throttle protein EttA low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_1325 Protein of unknown function DUF548 0.72 Psyr_4264 ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_1325 Protein of unknown function DUF548 0.72 Psyr_4264 ABC transporter — —
Pseudomonas segetis P6 0.41 MPMX49_01631 Ribosomal RNA small subunit methyltransferase J 0.71 MPMX49_03977 Energy-dependent translational throttle protein EttA low > 75
Pseudomonas stutzeri RCH2 0.41 Psest_1563 Protein of unknown function (DUF548). 0.72 Psest_3433 ATP-binding cassette protein, ChvD family low > 67
Pseudomonas sp. S08-1 0.41 OH686_06755 16S rRNA (guanine(1516)-N(2))-methyltransferase 0.72 OH686_16240 Energy-dependent translational throttle protein EttA 0.66 52
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18790 Ribosomal RNA small subunit methyltransferase J 0.74 IKLFDK_00540 energy-dependent translational throttle protein EttA low > 98
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS42550 class I SAM-dependent methyltransferase 0.74 DQ20_RS55925 ettA;go_function=ATP energy-dependent translational throttle protein EttA low > 101
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_16350 SAM-dependent methyltransferase 0.72 AO353_14030 ABC transporter ATP-binding protein low > 101
Pseudomonas sp. SVBP6 0.40 COO64_RS19535 class I SAM-dependent methyltransferase 0.72 COO64_RS03005 ettA energy-dependent translational throttle protein EttA low > 93
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS14575 class I SAM-dependent methyltransferase 0.74 DY961_RS23460 ettA;go_function=ATP energy-dependent translational throttle protein EttA low > 100
Pseudomonas sp. BP01 0.39 JOY50_RS26070 class I SAM-dependent methyltransferase 0.73 JOY50_RS24640 ettA energy-dependent translational throttle protein EttA low > 84
Pseudomonas putida KT2440 0.39 PP_1513 Ribosomal RNA small subunit methyltransferase J 0.73 PP_0674 ADP/ATP ratio sensor and inhibitor of translation low > 96
Pseudomonas orientalis W4I3 0.39 QF045_RS08950 class I SAM-dependent methyltransferase 0.72 QF045_RS26530 energy-dependent translational throttle protein EttA low > 93
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_06145 SAM-dependent methyltransferase 0.73 AO356_15735 ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4733 SAM-dependent methyltransferase (EC 2.1.1.-) 0.72 PfGW456L13_1453 Glutathione-regulated potassium-efflux system ATP-binding protein low > 87
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01390 Ribosomal RNA small subunit methyltransferase J 0.72 GEMAOFIL_04999 Energy-dependent translational throttle protein EttA low > 96
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.72 PFLU_RS26180 energy-dependent translational throttle protein EttA low > 109
Pseudomonas sp. DMC3 0.38 GFF2031 Ribosomal RNA small subunit methyltransferase J 0.72 GFF3965 Energy-dependent translational throttle protein EttA low > 89
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.72 PFLU_RS26180 energy-dependent translational throttle protein EttA 0.22 97
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3094 SAM-dependent methyltransferase (EC 2.1.1.-) 0.73 Pf6N2E2_5084 Glutathione-regulated potassium-efflux system ATP-binding protein 0.27 72
Pseudomonas simiae WCS417 0.38 PS417_06100 SAM-dependent methyltransferase 0.72 PS417_24265 ABC transporter ATP-binding protein low > 88
Alteromonas macleodii MIT1002 0.38 MIT1002_00112 Ribosomal RNA small subunit methyltransferase J 0.80 MIT1002_02704 putative ABC transporter ATP-binding protein low > 70
Pseudomonas sp. RS175 0.37 PFR28_00376 Ribosomal RNA small subunit methyltransferase J 0.73 PFR28_03784 Energy-dependent translational throttle protein EttA low > 88
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0446 Adenine-specific DNA methylase 0.74 B158DRAFT_0881 ATP-binding cassette protein, ChvD family low > 40

Not shown: 1 genomes with orthologs for CSW01_00395 only; 62 genomes with orthologs for CSW01_03650 only