Conservation of cofitness between CSW01_13680 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13680 DNA helicase RecG 1.0 CSW01_02830 murein hydrolase activator NlpD 0.81 4
Serratia liquefaciens MT49 0.69 IAI46_24905 ATP-dependent DNA helicase RecG 0.38 IAI46_03785 murein hydrolase activator NlpD low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.39 GFF4789 Lipoprotein NlpD low > 78
Rahnella sp. WP5 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.41 EX31_RS07830 murein hydrolase activator NlpD low > 89
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) 0.41 71
Alteromonas macleodii MIT1002 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Pseudomonas sp. BP01 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas sp. S08-1 0.56 OH686_13505 ATP-dependent DNA helicase RecG 0.29 OH686_18180 Murein hydrolase activator NlpD low > 80
Pseudomonas putida KT2440 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas aeruginosa PA14 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein low > 100
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG 0.29 GEMAOFIL_01442 hypothetical protein — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas sp. DMC3 0.55 GFF427 ATP-dependent DNA helicase RecG 0.29 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas sp. SVBP6 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Acinetobacter baumannii LAC-4 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG 0.20 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.21 OKGIIK_08100 Peptidase M23 low > 53
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Methylophilus sp. DMC18 0.45 GFF2125 ATP-dependent DNA helicase RecG 0.20 GFF448 Murein hydrolase activator NlpD low > 43
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.27 HSERO_RS14835 peptidase M23 0.47 27
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.23 Ac3H11_1786 Lipoprotein NlpD — —
Dechlorosoma suillum PS 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.30 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Castellaniella sp019104865 MT123 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.24 GFF3881 Lipoprotein NlpD low > 90
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.27 GFF2843 Murein hydrolase activator NlpD 0.81 45

Not shown: 79 genomes with orthologs for CSW01_13680 only; 0 genomes with orthologs for CSW01_02830 only