Conservation of cofitness between CSW01_12250 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12250 site-specific tyrosine recombinase XerD 1.0 CSW01_02830 murein hydrolase activator NlpD 0.76 10
Rahnella sp. WP5 0.70 EX31_RS13480 site-specific tyrosine recombinase XerD 0.41 EX31_RS07830 murein hydrolase activator NlpD low > 89
Serratia liquefaciens MT49 0.69 IAI46_20730 site-specific tyrosine recombinase XerD 0.38 IAI46_03785 murein hydrolase activator NlpD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2991 Tyrosine recombinase XerD 0.39 GFF4789 Lipoprotein NlpD low > 78
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_04365 recombinase XerD 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas sp. SVBP6 0.58 COO64_RS04910 xerD site-specific tyrosine recombinase XerD 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas sp. BP01 0.58 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas sp. DMC3 0.58 GFF1987 Tyrosine recombinase XerD 0.29 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas putida KT2440 0.58 PP_1468 Tyrosine recombinase XerD 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04729 Tyrosine recombinase XerD 0.29 GEMAOFIL_01442 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24560 site-specific tyrosine recombinase XerD 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24560 site-specific tyrosine recombinase XerD 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas aeruginosa MRSN321 0.56 DY961_RS14280 xerD;go_function=site-specific site-specific tyrosine recombinase XerD 0.30 DY961_RS14860 peptidoglycan DD-metalloendopeptidase family protein low > 100
Pseudomonas aeruginosa PUPa3 0.56 DQ20_RS42845 xerD;go_function=site-specific site-specific tyrosine recombinase XerD 0.30 DQ20_RS42265 peptidoglycan DD-metalloendopeptidase family protein low > 101
Shewanella oneidensis MR-1 0.56 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Pseudomonas aeruginosa PA14 0.56 IKLFDK_19085 site-specific tyrosine recombinase XerD 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein — —
Shewanella sp. ANA-3 0.56 Shewana3_3331 tyrosine recombinase XerD (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Pseudomonas sp. S08-1 0.56 OH686_17750 tyrosine recombinase XerD 0.29 OH686_18180 Murein hydrolase activator NlpD low > 80
Shewanella amazonensis SB2B 0.55 Sama_2739 integrase/recombinase XerD (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) 0.42 7
Alteromonas macleodii MIT1002 0.55 MIT1002_00786 Tyrosine recombinase XerD 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Shewanella loihica PV-4 0.54 Shew_0770 tyrosine recombinase XerD (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2265 tyrosine recombinase XerD 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Castellaniella sp019104865 MT123 0.50 ABCV34_RS00515 site-specific tyrosine recombinase XerD 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Methylophilus sp. DMC18 0.50 GFF2342 Tyrosine recombinase XerD 0.20 GFF448 Murein hydrolase activator NlpD low > 43
Dechlorosoma suillum PS 0.49 Dsui_1217 tyrosine recombinase XerD 0.30 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS04265 tyrosine recombinase XerD 0.27 HSERO_RS14835 peptidase M23 0.31 63
Acidovorax sp. GW101-3H11 0.48 Ac3H11_302 Tyrosine recombinase XerD 0.23 Ac3H11_1786 Lipoprotein NlpD — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS03345 recombinase XerD 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Variovorax sp. OAS795 0.47 ABID97_RS20265 site-specific tyrosine recombinase XerD 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Variovorax sp. SCN45 0.47 GFF2772 Site-specific tyrosine recombinase XerD 0.27 GFF2843 Murein hydrolase activator NlpD 0.85 11
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5461 Tyrosine recombinase XerD 0.24 GFF3881 Lipoprotein NlpD low > 90
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS19225 site-specific tyrosine recombinase XerD 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD 0.21 OKGIIK_08100 Peptidase M23 low > 53
Rhodanobacter denitrificans MT42 0.44 LRK55_RS04515 site-specific tyrosine recombinase XerD 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS04735 site-specific tyrosine recombinase XerD 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein 0.36 47
Acinetobacter baumannii LAC-4 0.44 RR41_RS17765 site-specific tyrosine recombinase XerD 0.20 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter sp000427505 FW510-R12 0.43 LRK53_RS05285 site-specific tyrosine recombinase XerD 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —

Not shown: 83 genomes with orthologs for CSW01_12250 only; 0 genomes with orthologs for CSW01_02830 only