Conservation of cofitness between CSW01_05185 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05185 excinuclease ABC subunit UvrB 1.0 CSW01_02830 murein hydrolase activator NlpD 0.48 20
Serratia liquefaciens MT49 0.78 IAI46_06550 excinuclease ABC subunit B 0.38 IAI46_03785 murein hydrolase activator NlpD low > 87
Rahnella sp. WP5 0.77 EX31_RS23720 excinuclease ABC subunit B 0.41 EX31_RS07830 murein hydrolase activator NlpD low > 89
Shewanella loihica PV-4 0.76 Shew_2064 excinuclease ABC subunit B (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF675 Excinuclease ABC subunit B 0.39 GFF4789 Lipoprotein NlpD low > 78
Alteromonas macleodii MIT1002 0.75 MIT1002_01261 Excinuclease ABC subunit B 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Shewanella amazonensis SB2B 0.74 Sama_1828 excinuclease ABC subunit B (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Shewanella oneidensis MR-1 0.74 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_2166 excinuclease ABC subunit B (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Pseudomonas aeruginosa MRSN321 0.72 DY961_RS01215 uvrB;go_component=excinuclease excinuclease ABC subunit UvrB 0.30 DY961_RS14860 peptidoglycan DD-metalloendopeptidase family protein low > 100
Pseudomonas aeruginosa PUPa3 0.72 DQ20_RS34340 uvrB;go_component=excinuclease excinuclease ABC subunit UvrB 0.30 DQ20_RS42265 peptidoglycan DD-metalloendopeptidase family protein low > 101
Pseudomonas aeruginosa PA14 0.72 IKLFDK_15985 excinuclease ABC subunit UvrB 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein low > 98
Pseudomonas sp. DMC3 0.72 GFF774 UvrABC system protein B 0.29 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_20545 excinuclease ABC subunit B 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas sp. SVBP6 0.72 COO64_RS05730 uvrB excinuclease ABC subunit UvrB 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS20655 excinuclease ABC subunit B 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas putida KT2440 0.72 PP_1974 excinuclease UvrABC protein B 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas fluorescens SBW25 0.72 PFLU_RS20655 excinuclease ABC subunit B 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas sp. BP01 0.72 JOY50_RS16715 uvrB excinuclease ABC subunit UvrB 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas lactucae CFBP13502 0.72 GEMAOFIL_03964 UvrABC system protein B 0.29 GEMAOFIL_01442 hypothetical protein — —
Pseudomonas sp. S08-1 0.70 OH686_04580 excinuclease ABC subunit B 0.29 OH686_18180 Murein hydrolase activator NlpD low > 80
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS09750 excinuclease ABC subunit UvrB 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB 0.21 OKGIIK_08100 Peptidase M23 low > 53
Rhodanobacter denitrificans MT42 0.69 LRK55_RS13955 excinuclease ABC subunit UvrB 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS14235 excinuclease ABC subunit UvrB 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.69 LRK53_RS14375 excinuclease ABC subunit UvrB 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_2341 Excinuclease ABC subunit B 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Acinetobacter baumannii LAC-4 0.67 RR41_RS04945 excinuclease ABC subunit UvrB 0.20 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein low > 55
Dechlorosoma suillum PS 0.66 Dsui_2434 excinuclease ABC, B subunit 0.30 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS05995 excinuclease ABC subunit B 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS15840 excinuclease ABC subunit B 0.27 HSERO_RS14835 peptidase M23 0.43 21
Castellaniella sp019104865 MT123 0.64 ABCV34_RS05110 excinuclease ABC subunit UvrB 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Methylophilus sp. DMC18 0.63 GFF1123 UvrABC system protein B 0.20 GFF448 Murein hydrolase activator NlpD low > 43
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4114 Excinuclease ABC subunit B 0.23 Ac3H11_1786 Lipoprotein NlpD — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4962 Excinuclease ABC subunit B 0.24 GFF3881 Lipoprotein NlpD low > 90
Variovorax sp. OAS795 0.62 ABID97_RS13995 excinuclease ABC subunit UvrB 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Variovorax sp. SCN45 0.62 GFF945 Excinuclease ABC subunit B 0.27 GFF2843 Murein hydrolase activator NlpD 0.85 42

Not shown: 81 genomes with orthologs for CSW01_05185 only; 0 genomes with orthologs for CSW01_02830 only