Conservation of cofitness between CSW01_00260 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 1.0 CSW01_02830 murein hydrolase activator NlpD 0.62 11
Alteromonas macleodii MIT1002 0.46 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Acinetobacter baumannii LAC-4 0.39 RR41_RS18910 5-(carboxyamino)imidazole ribonucleotide synthase 0.20 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein low > 55
Pseudomonas sp. S08-1 0.37 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.29 OH686_18180 Murein hydrolase activator NlpD — —
Pseudomonas sp. BP01 0.37 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas putida KT2440 0.36 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas sp. SVBP6 0.36 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase 0.29 GEMAOFIL_01442 hypothetical protein — —
Pseudomonas sp. DMC3 0.36 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase 0.29 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas aeruginosa PA14 0.34 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein low > 98
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS57855 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 DQ20_RS42265 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas aeruginosa MRSN321 0.34 DY961_RS25395 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 DY961_RS14860 peptidoglycan DD-metalloendopeptidase family protein low > 100
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 OKGIIK_08100 Peptidase M23 — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein — —
Shewanella sp. ANA-3 0.29 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.39 GFF4789 Lipoprotein NlpD low > 78
Serratia liquefaciens MT49 0.29 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 IAI46_03785 murein hydrolase activator NlpD low > 87
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Rahnella sp. WP5 0.29 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.41 EX31_RS07830 murein hydrolase activator NlpD low > 89
Shewanella amazonensis SB2B 0.29 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Shewanella loihica PV-4 0.29 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.28 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.24 GFF3881 Lipoprotein NlpD — —
Methylophilus sp. DMC18 0.24 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase 0.20 GFF448 Murein hydrolase activator NlpD — —
Variovorax sp. SCN45 0.24 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.27 GFF2843 Murein hydrolase activator NlpD 0.87 48
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.27 HSERO_RS14835 peptidase M23 — —
Castellaniella sp019104865 MT123 0.23 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Variovorax sp. OAS795 0.23 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein — —
Dechlorosoma suillum PS 0.23 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.30 Dsui_1970 metalloendopeptidase-like membrane protein — —
Acidovorax sp. GW101-3H11 0.22 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.23 Ac3H11_1786 Lipoprotein NlpD — —
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD — —

Not shown: 76 genomes with orthologs for CSW01_00260 only; 0 genomes with orthologs for CSW01_02830 only