Conservation of cofitness between CSW01_09445 and CSW01_02525 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09445 transcription-repair coupling factor 1.0 CSW01_02525 iron-regulated outer membrane virulence protein 0.56 4
Rahnella sp. WP5 0.65 EX31_RS24520 transcription-repair coupling factor 0.16 EX31_RS08250 TonB-dependent siderophore receptor low > 89
Escherichia coli ECOR38 0.65 HEPCGN_24015 mfd transcription-repair coupling factor 0.30 HEPCGN_11000 ireA TonB-dependent siderophore receptor IreA low > 88
Serratia liquefaciens MT49 0.64 IAI46_10320 transcription-repair coupling factor 0.40 IAI46_17185 ligand-gated channel protein low > 86
Escherichia coli BW25113 0.64 b1114 mfd transcription-repair coupling factor (NCBI) 0.27 b2155 cirA ferric iron-catecholate outer membrane transporter (NCBI) low > 76
Escherichia coli ECRC100 0.64 OKFHMN_03470 mfd transcription-repair coupling factor 0.27 OKFHMN_04115 iha bifunctional siderophore receptor/adhesin Iha low > 79
Escherichia coli ECRC98 0.64 JDDGAC_07130 mfd transcription-repair coupling factor 0.27 JDDGAC_07705 iha bifunctional siderophore receptor/adhesin Iha low > 87
Escherichia fergusonii Becca 0.64 EFB2_02861 Transcription-repair-coupling factor 0.30 EFB2_04431 Colicin I receptor low > 86
Escherichia coli ECRC99 0.64 KEDOAH_24285 mfd transcription-repair coupling factor 0.27 KEDOAH_23655 iha bifunctional siderophore receptor/adhesin Iha — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_02552 Transcription-repair-coupling factor 0.27 OHPLBJKB_01556 Colicin I receptor low > 74
Escherichia coli ECRC101 0.64 MCAODC_22830 mfd transcription-repair coupling factor 0.27 MCAODC_23465 iha bifunctional siderophore receptor/adhesin Iha low > 88
Escherichia coli ECRC102 0.64 NIAGMN_24360 mfd transcription-repair coupling factor 0.27 NIAGMN_03545 iha bifunctional siderophore receptor/adhesin Iha low > 80
Escherichia coli ECRC62 0.64 BNILDI_19160 mfd transcription-repair coupling factor 0.27 BNILDI_14000 cirA catecholate siderophore receptor CirA low > 75
Escherichia coli ECOR27 0.64 NOLOHH_20995 mfd transcription-repair coupling factor 0.27 NOLOHH_15080 cirA catecholate siderophore receptor CirA low > 76
Escherichia coli BL21 0.64 ECD_01110 transcription-repair coupling factor 0.27 ECD_02084 colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter low > 61
Pectobacterium carotovorum WPP14 0.64 HER17_RS08775 transcription-repair coupling factor 0.27 HER17_RS12830 TonB-dependent receptor low > 75
Pantoea sp. MT58 0.64 IAI47_11975 transcription-repair coupling factor 0.28 IAI47_04670 catecholate siderophore receptor CirA low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS11205 transcription-repair coupling factor 0.27 BWI76_RS19680 catecholate siderophore receptor CirA low > 92
Enterobacter asburiae PDN3 0.64 EX28DRAFT_1816 transcription-repair coupling factor (mfd) 0.27 EX28DRAFT_0401 Outer membrane receptor for ferrienterochelin and colicins low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3397 Transcription-repair coupling factor 0.28 GFF3779 Colicin I receptor precursor low > 78
Enterobacter sp. TBS_079 0.64 MPMX20_01795 Transcription-repair-coupling factor 0.39 MPMX20_03126 Colicin I receptor low > 85
Dickeya dadantii 3937 0.64 DDA3937_RS13000 transcription-repair coupling factor 0.17 DDA3937_RS17895 TonB-dependent siderophore receptor low > 74
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS19410 transcription-repair coupling factor 0.17 PagCFBP13505_RS08210 TonB-dependent siderophore receptor low > 74
Erwinia tracheiphila SCR3 0.63 LU632_RS14730 mfd transcription-repair coupling factor 0.28 LU632_RS00250 cirA catecholate siderophore receptor CirA low > 74
Klebsiella pneumoniae MKP103 0.63 KDGMDA_18800 transcription-repair coupling factor 0.27 KDGMDA_26635 catecholate siderophore receptor CirA low > 95
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_00560 mfd transcription-repair coupling factor 0.28 IJEDHG_10070 cirA catecholate siderophore receptor CirA low > 61
Alteromonas macleodii MIT1002 0.57 MIT1002_01646 Transcription-repair-coupling factor 0.21 MIT1002_00918 Colicin I receptor precursor low > 70
Shewanella oneidensis MR-1 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) 0.51 SO_4523 irgA enterobactin receptor protein (RefSeq) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) 0.50 Shewana3_3929 enterobactin receptor protein (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.55 Psest_1653 transcription-repair coupling factor (mfd) 0.27 Psest_3341 Outer membrane receptor for ferrienterochelin and colicins low > 67
Pseudomonas aeruginosa PA14 0.55 IKLFDK_15275 transcription-repair coupling factor 0.21 IKLFDK_09395 TonB-dependent receptor low > 100
Pseudomonas segetis P6 0.54 MPMX49_01844 Transcription-repair-coupling factor 0.18 MPMX49_02388 Ferric enterobactin receptor low > 75
Pseudomonas sp. SVBP6 0.54 COO64_RS09460 mfd transcription-repair coupling factor 0.45 COO64_RS11375 ligand-gated channel protein low > 93
Pseudomonas sp. BP01 0.54 JOY50_RS25100 mfd transcription-repair coupling factor 0.16 JOY50_RS25375 TonB-dependent siderophore receptor low > 84
Pseudomonas putida KT2440 0.54 PP_2148 transcription-repair coupling factor 0.17 PP_2242 ferric enterobactin transport system outer membrane subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_2278 Transcription-repair coupling factor 0.32 Pf6N2E2_872 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 103
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_02270 transcription-repair coupling factor 0.32 AO356_27385 ligand-gated channel protein low > 104
Pseudomonas fluorescens SBW25 0.53 PFLU_RS07710 transcription-repair coupling factor 0.32 PFLU_RS17765 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS07710 transcription-repair coupling factor 0.32 PFLU_RS17765 TonB-dependent receptor low > 109
Marinobacter adhaerens HP15 0.52 HP15_2257 transcription-repair-coupling factor 0.11 HP15_3002 TonB-dependent receptor low > 73
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_09105 mfd transcription-repair coupling factor 0.16 OKGIIK_05420 TonB-dependent receptor low > 53
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01445 transcription-repair coupling factor 0.08 RALBFv3_RS19830 TonB-dependent receptor low > 76
Ralstonia solanacearum GMI1000 0.46 RS_RS08275 transcription-repair coupling factor 0.08 RS_RS20995 TonB-dependent receptor low > 80
Ralstonia solanacearum UW163 0.46 UW163_RS14755 transcription-repair coupling factor 0.08 UW163_RS19345 TonB-dependent receptor — —
Acinetobacter baumannii LAC-4 0.46 RR41_RS12305 transcription-repair coupling factor 0.15 RR41_RS08835 TonB-dependent siderophore receptor low > 55
Acinetobacter radioresistens SK82 0.45 MPMX26_01319 Transcription-repair-coupling factor 0.14 MPMX26_02344 Ferric enterobactin receptor low > 36
Ralstonia solanacearum PSI07 0.45 RPSI07_RS16040 transcription-repair coupling factor 0.09 RPSI07_RS03355 TonB-dependent receptor low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4934 Transcription-repair coupling factor 0.24 GFF3912 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 90
Sinorhizobium meliloti 1021 0.32 SMc04450 transcription-repair coupling factor 0.06 SMc02890 outer membrane receptor protein low > 103
Agrobacterium fabrum C58 0.32 Atu1778 transcription-repair coupling factor 0.33 Atu3916 exogenous ferric siderophore receptor low > 89
Sphingobium sp. HT1-2 0.32 GFF3606 Transcription-repair coupling factor 0.36 GFF3042 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 95

Not shown: 55 genomes with orthologs for CSW01_09445 only; 6 genomes with orthologs for CSW01_02525 only