Conservation of cofitness between CSW01_01515 and CSW01_02500 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01515 type II 3-dehydroquinate dehydratase 1.0 CSW01_02500 deoxyribonuclease 0.39 20
Shewanella sp. ANA-3 0.71 Shewana3_0511 3-dehydroquinate dehydratase (RefSeq) 0.56 Shewana3_3443 endonuclease I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO0512 aroQ 3-dehydroquinate dehydratase, type II (NCBI ptt file) 0.58 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.68 EX28DRAFT_3306 3-dehydroquinate dehydratase (EC 4.2.1.10) 0.62 EX28DRAFT_2983 Endonuclease I — —
Enterobacter sp. TBS_079 0.68 MPMX20_04162 3-dehydroquinate dehydratase 0.63 MPMX20_03803 Endonuclease-1 low > 85
Shewanella loihica PV-4 0.67 Shew_3363 3-dehydroquinate dehydratase, type II (RefSeq) 0.55 Shew_3223 deoxyribonuclease I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.65 Sama_3194 3-dehydroquinate dehydratase (RefSeq) 0.55 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Pseudomonas sp. DMC3 0.64 GFF3316 3-dehydroquinate dehydratase 1 0.50 GFF893 Extracellular deoxyribonuclease — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06295 type II 3-dehydroquinate dehydratase 0.63 KDGMDA_04580 deoxyribonuclease I low > 95
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_4399 3-dehydroquinate dehydratase 0.47 Psyr_2148 Deoxyribonuclease I — —
Pseudomonas aeruginosa PUPa3 0.63 DQ20_RS52045 aroQ;go_function=3-dehydroquinate type II 3-dehydroquinate dehydratase 0.45 DQ20_RS32225 endonuclease I family protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_4399 3-dehydroquinate dehydratase 0.47 Psyr_2148 Deoxyribonuclease I — —
Pseudomonas aeruginosa PA14 0.63 IKLFDK_29330 type II 3-dehydroquinate dehydratase 0.45 IKLFDK_13855 deoxyribonuclease — —
Pseudomonas aeruginosa MRSN321 0.63 DY961_RS10010 aroQ;go_function=3-dehydroquinate type II 3-dehydroquinate dehydratase 0.45 DY961_RS03410 endonuclease I family protein — —
Pseudomonas sp. BP01 0.63 JOY50_RS23135 aroQ type II 3-dehydroquinate dehydratase 0.47 JOY50_RS04250 endonuclease low > 84
Pseudomonas segetis P6 0.63 ACVTMO_RS20335 aroQ type II 3-dehydroquinate dehydratase 0.45 ACVTMO_RS07865 endonuclease low > 75
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_50 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.48 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_00827 3-dehydroquinate dehydratase 1 0.48 GEMAOFIL_03914 Extracellular deoxyribonuclease low > 96
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1307 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.48 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas fluorescens SBW25 0.62 PFLU_RS03050 type II 3-dehydroquinate dehydratase 0.49 PFLU_RS20395 deoxyribonuclease — —
Pseudomonas putida KT2440 0.62 PP_0560 3-dehydroquinate dehydratase 1, type II 0.46 PP_2451 extracellular DNA endonuclease — —
Pseudomonas sp. SVBP6 0.62 COO64_RS18370 aroQ type II 3-dehydroquinate dehydratase 0.47 COO64_RS10310 endonuclease low > 93
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS03050 type II 3-dehydroquinate dehydratase 0.49 PFLU_RS20395 deoxyribonuclease — —
Pseudomonas sp. S08-1 0.62 OH686_07585 3-dehydroquinate dehydratase, type II 0.45 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_3510 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.48 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_13685 3-dehydroquinate dehydratase 0.48 AO353_20795 deoxyribonuclease low > 101
Pseudomonas stutzeri RCH2 0.62 Psest_1021 3-dehydroquinate dehydratase, type II 0.51 Psest_1274 Endonuclease I — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_08185 3-dehydroquinate dehydratase 0.47 AO356_00985 deoxyribonuclease — —
Pseudomonas sp. RS175 0.61 PFR28_05222 3-dehydroquinate dehydratase 1 0.48 PFR28_02739 Extracellular deoxyribonuclease — —
Pseudomonas simiae WCS417 0.61 PS417_02975 3-dehydroquinate dehydratase 0.49 PS417_18420 deoxyribonuclease low > 88
Serratia liquefaciens MT49 0.61 IAI46_22745 type II 3-dehydroquinate dehydratase 0.61 IAI46_21380 deoxyribonuclease I low > 87
Pseudomonas orientalis W4I3 0.61 QF045_RS06010 type II 3-dehydroquinate dehydratase 0.48 QF045_RS20570 endonuclease I family protein low > 93
Pectobacterium carotovorum WPP14 0.61 HER17_RS20195 type II 3-dehydroquinate dehydratase 0.61 HER17_RS02645 deoxyribonuclease I low > 75
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS11010 type II 3-dehydroquinate dehydratase 0.61 PagCFBP13505_RS16070 deoxyribonuclease I — —
Rahnella sp. WP5 0.60 EX31_RS12215 type II 3-dehydroquinate dehydratase 0.61 EX31_RS02655 deoxyribonuclease I low > 89
Pantoea sp. MT58 0.60 IAI47_02415 type II 3-dehydroquinate dehydratase 0.61 IAI47_03625 deoxyribonuclease I — —
Erwinia tracheiphila HP pepo 2.2 0.59 IJEDHG_13535 aroQ type II 3-dehydroquinate dehydratase 0.57 IJEDHG_03420 endA deoxyribonuclease I — —
Erwinia amylovora T8 0.59 OLJFJH_06885 type II 3-dehydroquinate dehydratase 0.59 OLJFJH_08580 deoxyribonuclease I — —
Dickeya dadantii 3937 0.58 DDA3937_RS01405 type II 3-dehydroquinate dehydratase 0.61 DDA3937_RS18550 deoxyribonuclease I — —
Dickeya dianthicola ME23 0.57 DZA65_RS01385 type II 3-dehydroquinate dehydratase 0.62 DZA65_RS19620 deoxyribonuclease I — —
Dickeya dianthicola 67-19 0.57 HGI48_RS01325 type II 3-dehydroquinate dehydratase 0.61 HGI48_RS18485 deoxyribonuclease I — —

Not shown: 66 genomes with orthologs for CSW01_01515 only; 15 genomes with orthologs for CSW01_02500 only