Conservation of cofitness between CSW01_00775 and CSW01_02060 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00775 HTH-type transcriptional repressor FabR 1.0 CSW01_02060 methionine synthase 0.52 10
Pantoea sp. MT58 0.70 IAI47_00940 HTH-type transcriptional repressor FabR 0.75 IAI47_17990 methionine synthase low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13516_RS00935 fabR HTH-type transcriptional repressor FabR 0.75 PagCFBP13516_RS18235 metH methionine synthase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.76 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.76 BWI76_RS01685 methionine synthase low > 92
Pectobacterium carotovorum WPP14 0.70 HER17_RS00965 HTH-type transcriptional repressor FabR 0.76 HER17_RS02310 methionine synthase low > 75
Klebsiella pneumoniae MKP103 0.70 KDGMDA_09390 HTH-type transcriptional repressor FabR 0.76 KDGMDA_10165 methionine synthase low > 94
Enterobacter sp. TBS_079 0.70 MPMX20_04517 HTH-type transcriptional repressor FabR 0.75 MPMX20_00235 Methionine synthase low > 85
Klebsiella pneumoniae MRSN742743 0.70 GJGHJB_04888 fabR HTH-type transcriptional repressor FabR 0.76 GJGHJB_04733 metH methionine synthase low > 83
Dickeya dianthicola 67-19 0.70 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.75 HGI48_RS19130 methionine synthase low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.75 DZA65_RS20250 methionine synthase low > 75
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4426 transcriptional regulator, TetR family 0.76 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Escherichia coli ECRC99 0.69 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.76 KEDOAH_14920 metH methionine synthase
Escherichia fergusonii Becca 0.69 EFB2_04647 HTH-type transcriptional repressor FabR 0.75 EFB2_04592 Methionine synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.76 OHPLBJKB_04030 Methionine synthase low > 74
Escherichia coli ECOR38 0.69 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.76 HEPCGN_11885 metH methionine synthase low > 88
Escherichia coli ECOR27 0.69 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.76 NOLOHH_05380 metH methionine synthase low > 75
Escherichia coli ECRC62 0.69 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.76 BNILDI_06140 metH methionine synthase low > 75
Escherichia coli BL21 0.69 ECD_03848 transcriptional repressor of fabA and fabB 0.76 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Escherichia coli BW25113 0.69 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.76 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli ECRC101 0.69 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.76 MCAODC_03740 metH methionine synthase low > 87
Escherichia coli ECRC102 0.69 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.76 NIAGMN_10990 metH methionine synthase low > 80
Escherichia coli Nissle 1917 0.69 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.75 ECOLIN_RS23160 methionine synthase low > 55
Escherichia coli ECRC100 0.69 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.76 OKFHMN_13240 metH methionine synthase low > 79
Escherichia coli ECRC98 0.69 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.75 JDDGAC_16865 metH methionine synthase low > 87
Serratia liquefaciens MT49 0.69 IAI46_24465 HTH-type transcriptional repressor FabR 0.75 IAI46_23155 methionine synthase low > 87
Dickeya dadantii 3937 0.69 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.76 DDA3937_RS19040 methionine synthase low > 74
Rahnella sp. WP5 0.69 EX31_RS14160 HTH-type transcriptional repressor FabR 0.75 EX31_RS11760 methionine synthase 0.68 2
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.65 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.63 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.67 Sama_0758 metH B12-dependent methionine synthase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1831 transcriptional regulator, TetR family 0.66 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 40
Marinobacter adhaerens HP15 0.53 HP15_2045 DNA-binding transcriptional repressor FabR 0.63 HP15_1792 B12-dependent methionine synthase low > 73
Acinetobacter radioresistens SK82 0.35 MPMX26_01029 HTH-type transcriptional repressor FabR 0.62 MPMX26_02351 Methionine synthase low > 36
Acinetobacter baumannii LAC-4 0.34 RR41_RS05210 HTH-type transcriptional repressor FabR 0.62 RR41_RS08790 methionine synthase low > 55
Pseudomonas segetis P6 0.27 ACVTMO_RS06170 TetR family transcriptional regulator 0.65 ACVTMO_RS12855 metH methionine synthase low > 75
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4450 transcriptional regulator, TetR family 0.64 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4450 transcriptional regulator, TetR family 0.64 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas sp. SVBP6 0.26 COO64_RS18070 TetR family transcriptional regulator 0.64 COO64_RS24910 metH methionine synthase low > 91
Pseudomonas protegens RBAN4 0.26 FABNJH_03155 fabR HTH-type transcriptional repressor FabR 0.65 FABNJH_18805 metH methionine synthase
Pseudomonas sp. DMC3 0.26 GFF3264 HTH-type transcriptional repressor FabR 0.65 GFF3687 Methionine synthase low > 89
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.64 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.64 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.65 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.65 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_08445 TetR family transcriptional regulator 0.64 AO356_00545 methionine synthase low > 104
Pseudomonas sp. RS175 0.26 PFR28_05164 HTH-type transcriptional repressor FabR 0.64 PFR28_01369 Methionine synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.64 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 103
Pseudomonas simiae WCS417 0.25 PS417_02720 TetR family transcriptional regulator 0.64 PS417_12310 methionine synthase low > 88
Pseudomonas sp. BP01 0.25 JOY50_RS17425 TetR family transcriptional regulator 0.65 JOY50_RS10720 metH methionine synthase low > 84
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_13415 TetR family transcriptional regulator 0.64 AO353_21615 methionine synthase low > 101

Not shown: 6 genomes with orthologs for CSW01_00775 only; 21 genomes with orthologs for CSW01_02060 only