Conservation of cofitness between CSW01_12055 and CSW01_01860 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12055 cobalamin-binding protein 1.0 CSW01_01860 SlyX protein 0.43 18
Rahnella sp. WP5 0.40 EX31_RS03185 vitamin B12 ABC transporter substrate-binding protein BtuF 0.44 EX31_RS04480 lysis protein low > 89
Shewanella sp. ANA-3 0.38 Shewana3_3272 periplasmic binding protein (RefSeq) 0.45 Shewana3_0901 SlyX family protein (RefSeq)
Shewanella amazonensis SB2B 0.37 Sama_2869 ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) 0.38 Sama_0640 SlyX protein (RefSeq) low > 62
Dickeya dadantii 3937 0.37 DDA3937_RS15875 vitamin B12 ABC transporter substrate-binding protein BtuF 0.46 DDA3937_RS19365 SlyX family protein
Dickeya dianthicola ME23 0.37 DZA65_RS17100 vitamin B12 ABC transporter substrate-binding protein BtuF 0.45 DZA65_RS20585 phi X174 lysis protein
Shewanella oneidensis MR-1 0.37 SO3709 ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) 0.42 SO1063 slyX slyX protein (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.36 HGI48_RS16015 vitamin B12 ABC transporter substrate-binding protein BtuF 0.45 HGI48_RS19495 SlyX family protein
Pectobacterium carotovorum WPP14 0.36 HER17_RS05645 vitamin B12 ABC transporter substrate-binding protein BtuF 0.43 HER17_RS01970 SlyX family protein low > 75
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13516_RS15890 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.46 PagCFBP13516_RS02060 SlyX family protein low > 80
Shewanella loihica PV-4 0.36 Shew_0719 periplasmic binding protein (RefSeq) 0.45 Shew_0838 SlyX family protein (RefSeq)
Klebsiella michiganensis M5al 0.34 BWI76_RS05165 cobalamin-binding protein 0.43 BWI76_RS25915 protein SlyX low > 92
Pantoea sp. MT58 0.33 IAI47_15575 vitamin B12 ABC transporter substrate-binding protein BtuF 0.45 IAI47_02045 SlyX family protein low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_00844 Vitamin B12-binding protein 0.41 MPMX20_04241 Protein SlyX low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF63 Vitamin B12 ABC transporter, B12-binding component BtuF 0.41 GFF3724 Protein SlyX
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3747 ABC-type Fe3+-hydroxamate transport system, periplasmic component 0.43 EX28DRAFT_4182 Uncharacterized protein conserved in bacteria low > 76
Klebsiella pneumoniae MRSN742743 0.31 GJGHJB_04108 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.43 GJGHJB_00382 slyX Protein SlyX low > 83
Klebsiella pneumoniae MKP103 0.31 KDGMDA_13410 vitamin B12 ABC transporter substrate-binding protein BtuF 0.43 KDGMDA_06770 Protein SlyX low > 94
Marinobacter adhaerens HP15 0.30 HP15_3954 substrate-binding periplasmic (PBP) ABC transporter protein 0.34 HP15_1158 SlyX protein low > 73
Escherichia coli BL21 0.30 ECD_00157 vitamin B12 ABC transporter periplasmic binding protein 0.42 ECD_03199 phi X174 lysis protein low > 61
Escherichia coli ECOR38 0.30 HEPCGN_08220 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 HEPCGN_16120 slyX Protein SlyX low > 88
Escherichia coli ECRC102 0.30 NIAGMN_08120 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 NIAGMN_15060 slyX Protein SlyX low > 80
Escherichia coli ECRC98 0.30 JDDGAC_13865 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 JDDGAC_20920 slyX Protein SlyX
Escherichia coli ECRC62 0.30 BNILDI_09055 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 BNILDI_02430 slyX Protein SlyX
Escherichia fergusonii Becca 0.30 EFB2_03886 Vitamin B12-binding protein 0.42 EFB2_00475 Protein SlyX low > 86
Escherichia coli ECRC100 0.30 OKFHMN_10270 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 OKFHMN_17290 slyX Protein SlyX
Escherichia coli ECRC99 0.30 KEDOAH_17885 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 KEDOAH_10850 slyX Protein SlyX
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_03504 Vitamin B12-binding protein 0.42 OHPLBJKB_00355 Protein SlyX low > 74
Escherichia coli BW25113 0.30 b0158 btuF vitamin B12-transporter protein BtuF (NCBI) 0.42 b3348 slyX hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.30 NOLOHH_02615 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 NOLOHH_09090 slyX Protein SlyX
Escherichia coli ECRC101 0.30 MCAODC_00785 btuF vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 MCAODC_07820 slyX Protein SlyX low > 87
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_05149 Vitamin B12-binding protein 0.38 GEMAOFIL_04650 Protein SlyX
Escherichia coli Nissle 1917 0.29 ECOLIN_RS00880 vitamin B12 ABC transporter substrate-binding protein BtuF 0.42 ECOLIN_RS19175 protein SlyX
Pseudomonas simiae WCS417 0.29 PS417_25220 iron-hydroxamate ABC transporter substrate-binding protein 0.38 PS417_22490 hypothetical protein
Pseudomonas aeruginosa PA14 0.28 IKLFDK_20855 cobalamin-binding protein 0.35 IKLFDK_04340 Protein SlyX-like protein
Pseudomonas aeruginosa PUPa3 0.28 NPBIFN_00917 Fe/B12 periplasmic-binding domain-containing protein 0.35 NPBIFN_04224 slyX Protein SlyX-like protein
Pseudomonas aeruginosa MRSN321 0.28 PFGADD_00912 Fe/B12 periplasmic-binding domain-containing protein 0.35 PFGADD_04165 slyX Protein SlyX-like protein
Pseudomonas sp. FW215-L2 0.27 GFF1768 Vitamin B12-binding protein 0.38 GFF3362 Protein SlyX
Pseudomonas fluorescens SBW25 0.27 PFLU_RS26855 cobalamin-binding protein 0.38 PFLU_RS24130 protein SlyX low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS26855 cobalamin-binding protein 0.38 PFLU_RS24130 protein SlyX low > 109
Pseudomonas stutzeri RCH2 0.27 Psest_3542 ABC-type Fe3+-hydroxamate transport system, periplasmic component 0.36 Psest_1490 Uncharacterized protein conserved in bacteria
Pseudomonas orientalis W4I3 0.27 QF045_RS27185 cobalamin-binding protein 0.38 QF045_RS24655 SlyX family protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_06665 iron-hydroxamate ABC transporter substrate-binding protein 0.36 AO353_03620 hypothetical protein
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_14980 iron-hydroxamate ABC transporter substrate-binding protein 0.37 AO356_17980 hypothetical protein
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2659 Vitamin B12 ABC transporter, B12-binding component BtuF 0.35 Pf1N1B4_645 Protein SlyX
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_1323 Vitamin B12 ABC transporter, B12-binding component BtuF 0.36 PfGW456L13_1844 Protein SlyX
Pseudomonas sp. SVBP6 0.26 COO64_RS15840 cobalamin-binding protein 0.33 COO64_RS20055 SlyX family protein low > 91
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4929 Vitamin B12 ABC transporter, B12-binding component BtuF 0.37 Pf6N2E2_5526 Protein SlyX
Pseudomonas segetis P6 0.25 ACVTMO_RS04960 cobalamin-binding protein 0.32 ACVTMO_RS08320 SlyX family protein low > 75

Not shown: 15 genomes with orthologs for CSW01_12055 only; 12 genomes with orthologs for CSW01_01860 only