Conservation of cofitness between CSW01_14230 and CSW01_01155 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14230 serine/threonine transporter SstT 1.0 CSW01_01155 DNA repair protein RadC 0.48 6
Shewanella oneidensis MR-1 0.82 SO3122 sodium/dicarboxylate symporter (NCBI ptt file) 0.54 SO4248 radC DNA repair protein RadC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.82 Shewana3_1426 serine/threonine transporter SstT (RefSeq) 0.54 Shewana3_3770 radC DNA repair protein RadC (RefSeq) low > 73
Shewanella loihica PV-4 0.81 Shew_1458 serine/threonine transporter SstT (RefSeq) 0.54 Shew_3481 DNA repair protein RadC (RefSeq) low > 60
Shewanella amazonensis SB2B 0.77 Sama_2200 serine/threonine transporter SstT (RefSeq) 0.58 Sama_0327 radC DNA repair protein RadC (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.68 HER17_RS18695 serine/threonine transporter SstT 0.52 HER17_RS20830 DNA repair protein RadC low > 75
Klebsiella pneumoniae MKP103 0.68 KDGMDA_05580 serine/threonine transporter SstT 0.50 KDGMDA_08030 DNA repair protein RadC low > 95
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS38720 sstT;go_component=membrane|0016020||IEA;go_function=symporter serine/threonine transporter SstT 0.58 DQ20_RS49645 radC;go_function=DNA DNA repair protein RadC low > 101
Pseudomonas aeruginosa MRSN321 0.68 DY961_RS16395 sstT;go_component=membrane|0016020||IEA;go_function=symporter serine/threonine transporter SstT 0.58 DY961_RS12485 radC;go_function=DNA DNA repair protein RadC low > 100
Pseudomonas aeruginosa PA14 0.68 IKLFDK_09990 serine/threonine transporter SstT 0.58 IKLFDK_26860 DNA repair protein RadC low > 98
Klebsiella michiganensis M5al 0.68 BWI76_RS24715 serine/threonine transporter SstT 0.48 BWI76_RS27365 hypothetical protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3191 Sodium:dicarboxylate symporter 0.50 GFF371 DNA repair protein RadC low > 78
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3158 Na+/serine symporter 0.47 EX28DRAFT_3888 DNA repair protein radc low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_03999 Serine/threonine transporter SstT 0.46 MPMX20_00097 hypothetical protein low > 85
Pseudomonas sp. SVBP6 0.67 COO64_RS10250 sstT serine/threonine transporter SstT 0.57 COO64_RS01465 radC DNA repair protein RadC low > 93
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3934 Sodium:dicarboxylate symporter 0.55 Pf1N1B4_2126 DNA repair protein RadC low > 87
Alteromonas macleodii MIT1002 0.67 MIT1002_00900 Na(+)/serine-threonine symporter 0.50 MIT1002_00049 DNA repair protein RadC low > 70
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_20105 serine/threonine protein kinase 0.58 AO353_09220 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_01815 serine/threonine protein kinase 0.55 AO356_12545 hypothetical protein low > 104
Escherichia coli BW25113 0.67 b3089 sstT sodium:serine/threonine symporter (NCBI) 0.50 b3638 radC DNA repair protein (VIMSS) low > 76
Escherichia coli ECRC100 0.67 OKFHMN_18535 sstT serine/threonine transporter SstT 0.50 OKFHMN_15620 radC DNA repair protein RadC low > 79
Escherichia coli ECRC98 0.67 JDDGAC_22170 sstT serine/threonine transporter SstT 0.50 JDDGAC_19245 radC DNA repair protein RadC low > 87
Escherichia coli ECRC62 0.67 BNILDI_01180 sstT serine/threonine transporter SstT 0.50 BNILDI_04015 radC DNA repair protein RadC low > 75
Escherichia coli ECRC99 0.67 KEDOAH_09610 sstT serine/threonine transporter SstT 0.50 KEDOAH_12530 radC DNA repair protein RadC — —
Escherichia coli ECOR27 0.67 NOLOHH_10335 sstT serine/threonine transporter SstT 0.50 NOLOHH_07500 radC DNA repair protein RadC low > 76
Escherichia coli ECRC101 0.67 MCAODC_09050 sstT serine/threonine transporter SstT 0.50 MCAODC_06130 radC DNA repair protein RadC low > 87
Escherichia coli ECRC102 0.67 NIAGMN_16300 sstT serine/threonine transporter SstT 0.50 NIAGMN_13380 radC DNA repair protein RadC low > 80
Serratia liquefaciens MT49 0.67 IAI46_22210 serine/threonine transporter SstT 0.56 IAI46_24825 DNA repair protein RadC low > 87
Escherichia coli ECOR38 0.66 HEPCGN_17390 sstT serine/threonine transporter SstT 0.50 HEPCGN_14445 radC DNA repair protein RadC low > 88
Escherichia coli BL21 0.66 ECD_02958 sodium:serine/threonine symporter 0.50 ECD_03495 UPF0758 family protein low > 61
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_2541 Sodium:dicarboxylate symporter 0.51 PfGW456L13_798 DNA repair protein RadC low > 87
Pseudomonas sp. RS175 0.66 PFR28_01214 Serine/threonine transporter SstT 0.58 PFR28_04412 hypothetical protein low > 88
Escherichia coli Nissle 1917 0.66 ECOLIN_RS17815 serine/threonine transporter SstT 0.50 ECOLIN_RS20730 DNA repair protein RadC low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00613 Serine/threonine transporter SstT 0.50 OHPLBJKB_00064 hypothetical protein low > 74
Escherichia fergusonii Becca 0.66 EFB2_00723 Serine/threonine transporter SstT 0.50 EFB2_00175 hypothetical protein low > 86
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_02177 Serine/threonine transporter SstT 0.53 GEMAOFIL_00021 hypothetical protein low > 96
Pseudomonas sp. DMC3 0.66 GFF1431 Serine/threonine transporter SstT 0.54 GFF403 hypothetical protein low > 89
Pseudomonas segetis P6 0.65 MPMX49_03181 Serine/threonine transporter SstT 0.60 MPMX49_00021 hypothetical protein low > 75
Pantoea sp. MT58 0.65 IAI47_02925 serine/threonine transporter SstT 0.53 IAI47_00620 DNA repair protein RadC low > 76
Pseudomonas sp. BP01 0.65 JOY50_RS04145 sstT serine/threonine transporter SstT 0.53 JOY50_RS09060 radC DNA repair protein RadC low > 84
Pseudomonas simiae WCS417 0.65 PS417_10435 serine/threonine protein kinase 0.53 PS417_27770 hypothetical protein low > 88
Pseudomonas orientalis W4I3 0.65 QF045_RS12415 serine/threonine transporter SstT 0.54 QF045_RS02120 DNA repair protein RadC low > 93
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS11535 serine/threonine transporter SstT 0.53 PagCFBP13505_RS18725 JAB domain-containing protein low > 74
Pseudomonas fluorescens SBW25 0.65 PFLU_RS10520 serine/threonine transporter SstT 0.54 PFLU_RS29445 JAB domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS10520 serine/threonine transporter SstT 0.54 PFLU_RS29445 JAB domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2230 Sodium:dicarboxylate symporter 0.55 Pf6N2E2_4377 DNA repair protein RadC low > 103
Pseudomonas putida KT2440 0.64 PP_2443 Serine/threonine transporter SstT 0.54 PP_5284 UPF0758 protein PP_5284 low > 96
Pseudomonas sp. S08-1 0.64 OH686_04635 Serine/threonine:Na+ symporter SstT 0.56 OH686_13620 UPF0758 family protein low > 80
Erwinia tracheiphila SCR3 0.62 LU632_RS02310 sstT serine/threonine transporter SstT 0.49 LU632_RS21995 radC DNA repair protein RadC low > 73
Pseudomonas stutzeri RCH2 0.62 Psest_2478 Na+/serine symporter 0.61 Psest_3803 DNA repair protein radc low > 67
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_06600 sstT serine/threonine transporter SstT 0.49 IJEDHG_07780 radC DNA repair protein RadC low > 61
Erwinia amylovora T8 0.60 OLJFJH_02205 serine/threonine transporter SstT 0.48 OLJFJH_05795 DNA repair protein RadC low > 58
Acinetobacter radioresistens SK82 0.56 MPMX26_01492 Serine/threonine transporter SstT 0.35 MPMX26_02636 hypothetical protein — —
Acinetobacter baumannii LAC-4 0.55 RR41_RS11960 serine/threonine transporter SstT 0.37 RR41_RS02900 DNA repair protein RadC low > 55
Phocaeicola dorei CL03T12C01 0.09 ABI39_RS14345 dicarboxylate/amino acid:cation symporter 0.27 ABI39_RS02750 DNA repair protein RadC low > 72

Not shown: 0 genomes with orthologs for CSW01_14230 only; 55 genomes with orthologs for CSW01_01155 only