Conservation of cofitness between CSW01_04975 and CSW01_01025 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04975 transcriptional regulator 1.0 CSW01_01025 LysE family translocator 0.46 20
Erwinia amylovora T8 0.56 OLJFJH_17700 Cu(I)-responsive transcriptional regulator 0.27 OLJFJH_01390 lysine transporter LysE low > 58
Enterobacter sp. TBS_079 0.56 MPMX20_01085 HTH-type transcriptional regulator CueR 0.23 MPMX20_04457 Threonine efflux protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4405 HTH-type transcriptional regulator cueR 0.26 GFF249 L-lysine permease low > 78
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2473 Cu(I)-responsive transcriptional regulator 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein low > 76
Escherichia coli ECRC100 0.54 OKFHMN_08035 cueR Cu(I)-responsive transcriptional regulator 0.27 OKFHMN_14355 rhtC threonine export protein RhtC low > 79
Escherichia coli ECRC99 0.54 KEDOAH_19935 cueR Cu(I)-responsive transcriptional regulator 0.27 KEDOAH_13795 rhtC threonine export protein RhtC — —
Escherichia coli ECRC102 0.54 NIAGMN_06085 cueR Cu(I)-responsive transcriptional regulator 0.27 NIAGMN_12110 rhtC threonine export protein RhtC low > 80
Escherichia coli ECRC101 0.54 MCAODC_27250 cueR Cu(I)-responsive transcriptional regulator 0.27 MCAODC_04860 rhtC threonine export protein RhtC low > 87
Escherichia coli ECOR38 0.54 HEPCGN_06670 cueR Cu(I)-responsive transcriptional regulator 0.27 HEPCGN_13055 rhtC threonine export protein RhtC low > 88
Escherichia coli ECRC98 0.54 JDDGAC_11680 cueR Cu(I)-responsive transcriptional regulator 0.27 JDDGAC_17980 rhtC threonine export protein RhtC low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS06910 transcriptional regulator 0.26 BWI76_RS01250 threonine export protein RhtC low > 92
Escherichia coli BL21 0.54 ECD_00438 copper-responsive regulon transcriptional regulator 0.27 ECD_03702 threonine efflux pump low > 61
Escherichia coli BW25113 0.54 b0487 cueR DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) 0.27 b3823 rhtC threonine efflux system (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03187 HTH-type transcriptional regulator CueR 0.27 OHPLBJKB_04228 Threonine efflux protein low > 74
Rahnella sp. WP5 0.54 EX31_RS22580 Cu(I)-responsive transcriptional regulator 0.26 EX31_RS03810 LysE family translocator low > 89
Escherichia coli ECOR27 0.54 NOLOHH_01000 cueR Cu(I)-responsive transcriptional regulator 0.27 NOLOHH_06485 rhtC threonine export protein RhtC low > 76
Escherichia coli ECRC62 0.54 BNILDI_22420 cueR Cu(I)-responsive transcriptional regulator 0.27 BNILDI_05045 rhtC threonine export protein RhtC low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS02880 Cu(I)-responsive transcriptional regulator 0.27 ECOLIN_RS21940 threonine export protein RhtC — —
Escherichia fergusonii Becca 0.53 EFB2_03572 HTH-type transcriptional regulator CueR 0.27 EFB2_04814 Threonine efflux protein low > 86
Klebsiella pneumoniae MKP103 0.53 KDGMDA_14950 Cu(I)-responsive transcriptional regulator 0.25 KDGMDA_09740 threonine export protein RhtC low > 95
Pantoea sp. MT58 0.51 IAI47_14395 Cu(I)-responsive transcriptional regulator 0.25 IAI47_18355 threonine export protein RhtC low > 76
Serratia liquefaciens MT49 0.51 IAI46_05315 Cu(I)-responsive transcriptional regulator 0.26 IAI46_03210 LysE family translocator low > 87
Dickeya dadantii 3937 0.50 DDA3937_RS05850 Cu(I)-responsive transcriptional regulator 0.25 DDA3937_RS18300 LysE family translocator low > 74
Dickeya dianthicola 67-19 0.50 HGI48_RS05895 Cu(I)-responsive transcriptional regulator 0.24 HGI48_RS20000 threonine export protein RhtC low > 71
Pectobacterium carotovorum WPP14 0.50 HER17_RS15620 Cu(I)-responsive transcriptional regulator 0.25 HER17_RS02915 LysE family translocator low > 75
Dickeya dianthicola ME23 0.50 DZA65_RS06230 Cu(I)-responsive transcriptional regulator 0.25 DZA65_RS21040 threonine export protein RhtC low > 75
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS10805 Cu(I)-responsive transcriptional regulator 0.25 PagCFBP13505_RS15335 threonine export protein RhtC low > 74
Pseudomonas sp. SVBP6 0.41 COO64_RS26335 cueR Cu(I)-responsive transcriptional regulator 0.24 COO64_RS03395 LysE family translocator low > 93
Pseudomonas stutzeri RCH2 0.40 Psest_0737 Cu(I)-responsive transcriptional regulator 0.28 Psest_3222 Putative threonine efflux protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0653 transcriptional regulator, MerR family 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0653 transcriptional regulator, MerR family 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_08070 transcriptional regulator 0.26 AO356_06930 lysine transporter LysE low > 104
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS52395 cueR;go_function=DNA-binding Cu(I)-responsive transcriptional regulator 0.40 DQ20_RS53860 LysE family translocator low > 101
Pseudomonas aeruginosa PA14 0.39 IKLFDK_29700 Cu(I)-responsive transcriptional regulator 0.40 IKLFDK_07765 lysine transporter LysE low > 98
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS09650 cueR;go_function=DNA-binding Cu(I)-responsive transcriptional regulator 0.40 DY961_RS19750 LysE family translocator low > 100
Pseudomonas sp. S08-1 0.39 OH686_07400 Cu(I)-responsive transcriptional regulator 0.25 OH686_06335 L-lysine permease low > 80
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3488 Cu(I)-responsive transcriptional regulator 0.26 Pf6N2E2_3245 L-lysine permease low > 103
Pseudomonas simiae WCS417 0.39 PS417_03155 transcriptional regulator 0.27 PS417_04535 lysine transporter LysE low > 88
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_25 Cu(I)-responsive transcriptional regulator 0.27 PfGW456L13_1618 L-lysine permease low > 87
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_06160 transcriptional regulator 0.26 AO353_15005 lysine transporter LysE low > 101
Pseudomonas sp. RS175 0.38 PFR28_05243 HTH-type transcriptional regulator HmrR 0.25 PFR28_03621 Threonine efflux protein low > 88
Pseudomonas orientalis W4I3 0.38 QF045_RS06190 Cu(I)-responsive transcriptional regulator 0.26 QF045_RS07505 LysE family transporter low > 93
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_00846 HTH-type transcriptional regulator HmrR 0.27 GEMAOFIL_01110 Threonine efflux protein low > 96
Pseudomonas sp. DMC3 0.38 GFF3355 HTH-type transcriptional regulator HmrR 0.26 GFF4453 Threonine efflux protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1263 Cu(I)-responsive transcriptional regulator 0.26 Pf1N1B4_2955 L-lysine permease low > 87
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03235 Cu(I)-responsive transcriptional regulator 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03235 Cu(I)-responsive transcriptional regulator 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Sinorhizobium meliloti 1021 0.36 SM_b21579 MerR family transcriptional regulator 0.23 SMc02484 amino acid efflux transmembrane protein low > 103
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS23915 Cu(I)-responsive transcriptional regulator 0.22 QEN71_RS00520 LysE family transporter low > 153
Rhizobium sp. OAE497 0.35 ABIE40_RS20305 Cu(I)-responsive transcriptional regulator 0.19 ABIE40_RS07035 LysE family transporter low > 107
Pseudomonas segetis P6 0.34 MPMX49_01108 HTH-type transcriptional regulator HmrR 0.41 MPMX49_02682 Threonine efflux protein low > 75
Shewanella sp. ANA-3 0.32 Shewana3_2762 MerR family transcriptional regulator (RefSeq) 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_1785 MerR family transcriptional regulator (RefSeq) 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) low > 62
Shewanella oneidensis MR-1 0.32 SO1687 transcriptional regulator, MerR family (NCBI ptt file) 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) low > 76

Not shown: 23 genomes with orthologs for CSW01_04975 only; 7 genomes with orthologs for CSW01_01025 only