Conservation of cofitness between CSW01_08405 and CSW01_00685 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08405 DNA-3-methyladenine glycosylase I 1.0 CSW01_00685 lysophospholipase 0.53 15
Serratia liquefaciens MT49 0.52 IAI46_00120 DNA-3-methyladenine glycosylase I 0.30 IAI46_00785 lysophospholipase L2 low > 87
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS20945 DNA-3-methyladenine glycosylase I 0.10 ABZR87_RS04225 alpha/beta hydrolase low > 80
Ralstonia solanacearum GMI1000 0.51 RS_RS20310 DNA-3-methyladenine glycosylase I 0.09 RS_RS16765 alpha/beta hydrolase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF463 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.29 GFF251 Lysophospholipase L2 (EC 3.1.1.5) low > 78
Klebsiella pneumoniae MKP103 0.49 KDGMDA_07650 DNA-3-methyladenine glycosylase I 0.29 KDGMDA_09755 lysophospholipase L2 low > 95
Klebsiella michiganensis M5al 0.49 BWI76_RS26920 DNA-3-methyladenine glycosylase I 0.30 BWI76_RS01260 lysophospholipase L2 low > 92
Escherichia coli Nissle 1917 0.49 ECOLIN_RS20310 DNA-3-methyladenine glycosylase I 0.30 ECOLIN_RS21960 lysophospholipase L2 — —
Escherichia coli ECOR38 0.49 HEPCGN_14930 tag DNA-3-methyladenine glycosylase I 0.30 HEPCGN_13045 pldB lysophospholipase L2 low > 88
Escherichia fergusonii Becca 0.49 EFB2_00258 DNA-3-methyladenine glycosylase 1 0.30 EFB2_04812 Lysophospholipase L2 low > 86
Escherichia coli ECRC62 0.49 BNILDI_03560 tag DNA-3-methyladenine glycosylase I 0.30 BNILDI_05055 pldB lysophospholipase L2 low > 75
Escherichia coli ECOR27 0.49 NOLOHH_07985 tag DNA-3-methyladenine glycosylase I 0.30 NOLOHH_06475 pldB lysophospholipase L2 low > 76
Dickeya dianthicola ME23 0.49 DZA65_RS00205 DNA-3-methyladenine glycosylase I 0.29 DZA65_RS21030 lysophospholipase L2 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00157 DNA-3-methyladenine glycosylase 1 0.30 OHPLBJKB_04226 Lysophospholipase L2 low > 74
Shewanella oneidensis MR-1 0.49 SO0016 tag DNA-3-methyladenine glycosidase I (NCBI ptt file) 0.32 SO4733 lypA lysophospholipase L2 (NCBI ptt file) low > 76
Escherichia coli BL21 0.49 ECD_03399 3-methyl-adenine DNA glycosylase I, constitutive 0.30 ECD_03704 lysophospholipase L2 low > 61
Escherichia coli ECRC98 0.49 JDDGAC_19670 tag DNA-3-methyladenine glycosylase I 0.30 JDDGAC_17970 pldB lysophospholipase L2 low > 87
Escherichia coli ECRC100 0.49 OKFHMN_16040 tag DNA-3-methyladenine glycosylase I 0.30 OKFHMN_14345 pldB lysophospholipase L2 low > 79
Shewanella sp. ANA-3 0.49 Shewana3_0018 DNA-3-methyladenine glycosylase I (RefSeq) 0.33 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.49 HER17_RS21160 DNA-3-methyladenine glycosylase I 0.32 HER17_RS01410 lysophospholipase L2 low > 75
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3809 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) 0.27 EX28DRAFT_4490 Lysophospholipase low > 76
Escherichia coli ECRC99 0.49 KEDOAH_12110 tag DNA-3-methyladenine glycosylase I 0.30 KEDOAH_13805 pldB lysophospholipase L2 — —
Escherichia coli ECRC102 0.49 NIAGMN_13800 tag DNA-3-methyladenine glycosylase I 0.30 NIAGMN_12100 pldB lysophospholipase L2 low > 80
Escherichia coli BW25113 0.49 b3549 tag 3-methyl-adenine DNA glycosylase I, constitutive (NCBI) 0.30 b3825 pldB lysophospholipase L(2) (NCBI) low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_00185 DNA-3-methyladenine glycosylase 1 0.28 MPMX20_04455 Lysophospholipase L2 low > 85
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07225 DNA-3-methyladenine glycosylase 0.09 HSERO_RS16170 lysophospholipase low > 78
Escherichia coli ECRC101 0.49 MCAODC_06555 tag DNA-3-methyladenine glycosylase I 0.30 MCAODC_04850 pldB lysophospholipase L2 low > 87
Rahnella sp. WP5 0.48 EX31_RS05880 DNA-3-methyladenine glycosylase I 0.30 EX31_RS15225 lysophospholipase L2 low > 89
Dickeya dianthicola 67-19 0.48 HGI48_RS00200 DNA-3-methyladenine glycosylase I 0.29 HGI48_RS19985 lysophospholipase L2 low > 71
Dickeya dadantii 3937 0.48 DDA3937_RS21070 DNA-3-methyladenine glycosylase I 0.30 DDA3937_RS19830 lysophospholipase L2 low > 74
Shewanella loihica PV-4 0.46 Shew_0011 DNA-3-methyladenine glycosylase I (RefSeq) 0.33 Shew_3723 alpha/beta hydrolase fold (RefSeq) low > 60
Shewanella amazonensis SB2B 0.46 Sama_0027 DNA-3-methyladenine glycosylase I (RefSeq) 0.31 Sama_0083 alpha/beta hydrolase fold (RefSeq) low > 62
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_09870 tag DNA-3-methyladenine glycosylase I 0.31 IJEDHG_08720 pldB lysophospholipase L2 low > 61
Rhodopseudomonas palustris CGA009 0.45 TX73_005485 DNA-3-methyladenine glycosylase I 0.16 TX73_004575 alpha/beta hydrolase — —
Erwinia tracheiphila SCR3 0.45 LU632_RS00080 DNA-3-methyladenine glycosylase I 0.30 LU632_RS24080 pldB lysophospholipase L2 low > 73
Rhizobium sp. OAE497 0.44 ABIE40_RS03590 DNA-3-methyladenine glycosylase I 0.17 ABIE40_RS16315 alpha/beta hydrolase low > 107
Erwinia amylovora T8 0.43 OLJFJH_05065 DNA-3-methyladenine glycosylase I 0.32 OLJFJH_06455 lysophospholipase L2 low > 58
Alteromonas macleodii MIT1002 0.42 MIT1002_00008 DNA-3-methyladenine glycosylase 1 0.23 MIT1002_00479 lysophospholipase L2 low > 70
Xanthobacter sp. DMC5 0.42 GFF3576 DNA-3-methyladenine glycosylase 1 0.16 GFF4159 Lysophospholipase L2 — —
Sinorhizobium meliloti 1021 0.42 SMc00923 DNA-3-methyladenine DNA glycosylase 0.17 SMc04041 lysophospholipase L2 protein — —
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS19195 DNA-3-methyladenine glycosylase I 0.31 PagCFBP13505_RS15320 lysophospholipase L2 low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS09505 DNA-3-methyladenine glycosylase I 0.15 A4249_RS12480 alpha/beta hydrolase low > 48
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0205 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) 0.13 Ga0059261_3246 Lysophospholipase low > 68
Pantoea sp. MT58 0.40 IAI47_00145 DNA-3-methyladenine glycosylase I 0.31 IAI47_18340 lysophospholipase L2 low > 76
Phaeobacter inhibens DSM 17395 0.38 PGA1_c22000 putative DNA-3-methyladenine glycosylase 1 0.18 PGA1_c07480 Lysophospholipase low > 62
Azospirillum sp. SherDot2 0.25 MPMX19_01727 hypothetical protein 0.15 MPMX19_00440 Lysophospholipase L2 low > 112

Not shown: 66 genomes with orthologs for CSW01_08405 only; 1 genomes with orthologs for CSW01_00685 only