Conservation of cofitness between CSW01_12695 and CSW01_00645 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12695 lactate dehydrogenase 1.0 CSW01_00645 DUF484 domain-containing protein 0.46 18
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03645 D-2-hydroxyacid dehydrogenase 0.15 ABCV34_RS13460 DUF484 family protein low > 48
Pectobacterium carotovorum WPP14 0.46 HER17_RS12825 2-hydroxyacid dehydrogenase 0.20 HER17_RS01345 DUF484 domain-containing protein low > 75
Dechlorosoma suillum PS 0.46 Dsui_0124 lactate dehydrogenase-like oxidoreductase 0.14 Dsui_0650 hypothetical protein low > 51
Pseudomonas sp. BP01 0.44 JOY50_RS06325 D-2-hydroxyacid dehydrogenase 0.18 JOY50_RS22605 DUF484 family protein low > 84
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS14205 D-2-hydroxyacid dehydrogenase 0.21 PagCFBP13505_RS15385 DUF484 domain-containing protein low > 74
Pantoea sp. MT58 0.40 IAI47_20620 D-2-hydroxyacid dehydrogenase 0.21 IAI47_18405 DUF484 domain-containing protein low > 76
Marinobacter adhaerens HP15 0.40 HP15_2931 glycerate dehydrogenase 0.18 HP15_249 protein containing DUF484 low > 73
Pseudomonas segetis P6 0.39 MPMX49_03707 Glycerate dehydrogenase 0.20 MPMX49_04535 hypothetical protein — —
Pseudomonas sp. S08-1 0.39 OH686_06340 D-3-phosphoglycerate dehydrogenase 0.20 OH686_13790 Protein of unknown function DUF484 low > 80
Pseudomonas sp. DMC3 0.37 GFF4454 Glycerate dehydrogenase 0.17 GFF369 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3246 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.16 Pf6N2E2_4417 Protein of unknown function DUF484 — —
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_01109 Putative 2-hydroxyacid dehydrogenase 0.17 GEMAOFIL_05656 hypothetical protein low > 93
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_06935 glycerate dehydrogenase 0.17 AO356_12730 hypothetical protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS04575 2-hydroxyacid dehydrogenase 0.19 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas simiae WCS417 0.36 PS417_04530 glycerate dehydrogenase 0.17 PS417_27590 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS04575 2-hydroxyacid dehydrogenase 0.19 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2954 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.17 Pf1N1B4_2172 Protein of unknown function DUF484 low > 87
Pseudomonas sp. RS175 0.35 PFR28_03622 Putative 2-hydroxyacid dehydrogenase 0.16 PFR28_04377 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_15000 glycerate dehydrogenase 0.18 AO353_09045 hypothetical protein low > 101
Shewanella loihica PV-4 0.35 Shew_0887 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.19 Shew_0324 hypothetical protein (RefSeq) low > 60
Pseudomonas sp. SVBP6 0.35 COO64_RS03380 2-hydroxyacid dehydrogenase 0.18 COO64_RS01265 DUF484 family protein 0.52 1
Pseudomonas stutzeri RCH2 0.35 Psest_3223 Lactate dehydrogenase and related dehydrogenases 0.19 Psest_3766 Uncharacterized protein conserved in bacteria — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1617 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.17 PfGW456L13_843 Protein of unknown function DUF484 low > 87
Pseudomonas putida KT2440 0.34 PP_0762 Glycerate dehydrogenase 0.18 PP_5229 conserved protein of unknown function low > 96
Alteromonas macleodii MIT1002 0.33 MIT1002_04054 Putative 2-hydroxyacid dehydrogenase 0.21 MIT1002_00158 hypothetical protein low > 70
Pseudomonas aeruginosa PA14 0.33 IKLFDK_00375 2-hydroxyacid dehydrogenase 0.19 IKLFDK_27055 DUF484 domain-containing protein low > 100
Shewanella oneidensis MR-1 0.32 SO3631 hprA glycerate dehydrogenase (NCBI ptt file) 0.22 SO4307 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.32 Shewana3_3201 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.23 Shewana3_0392 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.31 Sama_2811 glycerate dehydrogenase (RefSeq) 0.21 Sama_3248 hypothetical protein (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0240 Lactate dehydrogenase and related dehydrogenases 0.15 B158DRAFT_0245 Uncharacterized protein conserved in bacteria low > 40
Dickeya dianthicola ME23 0.23 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.22 DZA65_RS21095 DUF484 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.22 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.22 HGI48_RS20050 DUF484 domain-containing protein low > 71
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_04810 D-glycerate dehydrogenase 0.15 OKGIIK_15330 DUF484 domain-containing protein low > 53
Dickeya dadantii 3937 0.21 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.22 DDA3937_RS19895 DUF484 domain-containing protein low > 74
Klebsiella michiganensis M5al 0.20 BWI76_RS27925 D-isomer specific 2-hydroxyacid dehydrogenase 0.16 BWI76_RS01205 DUF484 family protein low > 92
Klebsiella pneumoniae MKP103 0.20 KDGMDA_07690 glyoxylate/hydroxypyruvate reductase GhrB 0.17 KDGMDA_09695 DUF484 domain-containing protein low > 95

Not shown: 29 genomes with orthologs for CSW01_12695 only; 31 genomes with orthologs for CSW01_00645 only