Conservation of cofitness between CSW01_14230 and CSW01_00065 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14230 serine/threonine transporter SstT 1.0 CSW01_00065 DNA replication and repair protein RecF 0.44 18
Shewanella oneidensis MR-1 0.82 SO3122 sodium/dicarboxylate symporter (NCBI ptt file) 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.82 Shewana3_1426 serine/threonine transporter SstT (RefSeq) 0.45 Shewana3_0011 recF recombination protein F (RefSeq) low > 73
Shewanella loihica PV-4 0.81 Shew_1458 serine/threonine transporter SstT (RefSeq) 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) low > 60
Shewanella amazonensis SB2B 0.77 Sama_2200 serine/threonine transporter SstT (RefSeq) 0.44 Sama_0015 recF recombination protein F (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.68 HER17_RS18695 serine/threonine transporter SstT 0.55 HER17_RS00015 DNA replication/repair protein RecF low > 75
Klebsiella pneumoniae MKP103 0.68 KDGMDA_05580 serine/threonine transporter SstT 0.54 KDGMDA_08670 DNA replication/repair protein RecF 0.17 94
Pseudomonas aeruginosa PA14 0.68 IKLFDK_09990 serine/threonine transporter SstT 0.38 IKLFDK_25545 DNA replication/repair protein RecF 0.39 15
Klebsiella michiganensis M5al 0.68 BWI76_RS24715 serine/threonine transporter SstT 0.54 BWI76_RS00010 DNA replication and repair protein RecF 0.17 42
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3158 Na+/serine symporter 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3191 Sodium:dicarboxylate symporter 0.54 GFF1756 DNA recombination and repair protein RecF low > 78
Enterobacter sp. TBS_079 0.67 MPMX20_03999 Serine/threonine transporter SstT 0.54 MPMX20_00003 DNA replication and repair protein RecF low > 85
Pseudomonas sp. SVBP6 0.67 COO64_RS10250 sstT serine/threonine transporter SstT 0.37 COO64_RS02120 recF DNA replication/repair protein RecF low > 93
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3934 Sodium:dicarboxylate symporter 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF low > 87
Alteromonas macleodii MIT1002 0.67 MIT1002_00900 Na(+)/serine-threonine symporter 0.35 MIT1002_00003 DNA replication and repair protein RecF low > 70
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_20105 serine/threonine protein kinase 0.37 AO353_10480 recombinase RecF low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_01815 serine/threonine protein kinase 0.37 AO356_11635 recombinase RecF low > 104
Escherichia coli ECRC62 0.67 BNILDI_01180 sstT serine/threonine transporter SstT 0.55 BNILDI_04365 recF DNA replication/repair protein RecF low > 75
Escherichia coli BW25113 0.67 b3089 sstT sodium:serine/threonine symporter (NCBI) 0.55 b3700 recF recombination protein F (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_09050 sstT serine/threonine transporter SstT 0.55 MCAODC_05535 recF DNA replication/repair protein RecF low > 87
Escherichia coli ECRC99 0.67 KEDOAH_09610 sstT serine/threonine transporter SstT 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC98 0.67 JDDGAC_22170 sstT serine/threonine transporter SstT 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF low > 87
Escherichia coli ECRC100 0.67 OKFHMN_18535 sstT serine/threonine transporter SstT 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF low > 79
Escherichia coli ECOR27 0.67 NOLOHH_10335 sstT serine/threonine transporter SstT 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF 0.41 66
Escherichia coli ECRC102 0.67 NIAGMN_16300 sstT serine/threonine transporter SstT 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF low > 80
Serratia liquefaciens MT49 0.67 IAI46_22210 serine/threonine transporter SstT 0.56 IAI46_00015 DNA replication/repair protein RecF low > 87
Pseudomonas sp. RS175 0.66 PFR28_01214 Serine/threonine transporter SstT 0.38 PFR28_04593 DNA replication and repair protein RecF low > 88
Escherichia coli ECOR38 0.66 HEPCGN_17390 sstT serine/threonine transporter SstT 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF low > 88
Escherichia coli BL21 0.66 ECD_02958 sodium:serine/threonine symporter 0.55 ECD_03583 gap repair protein low > 61
Escherichia coli Nissle 1917 0.66 ECOLIN_RS17815 serine/threonine transporter SstT 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF low > 55
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_2541 Sodium:dicarboxylate symporter 0.37 PfGW456L13_664 DNA recombination and repair protein RecF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00613 Serine/threonine transporter SstT 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF low > 74
Escherichia fergusonii Becca 0.66 EFB2_00723 Serine/threonine transporter SstT 0.55 EFB2_00003 DNA replication and repair protein RecF low > 86
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_02177 Serine/threonine transporter SstT 0.38 GEMAOFIL_00183 DNA replication and repair protein RecF low > 96
Pseudomonas sp. DMC3 0.66 GFF1431 Serine/threonine transporter SstT 0.38 GFF578 DNA replication and repair protein RecF low > 89
Pseudomonas segetis P6 0.65 MPMX49_03181 Serine/threonine transporter SstT 0.38 MPMX49_00255 DNA replication and repair protein RecF low > 75
Pantoea sp. MT58 0.65 IAI47_02925 serine/threonine transporter SstT 0.56 IAI47_00015 DNA replication/repair protein RecF low > 76
Pseudomonas sp. BP01 0.65 JOY50_RS04145 sstT serine/threonine transporter SstT 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF low > 84
Pseudomonas simiae WCS417 0.65 PS417_10435 serine/threonine protein kinase 0.37 PS417_00015 recombinase RecF low > 88
Pseudomonas orientalis W4I3 0.65 QF045_RS12415 serine/threonine transporter SstT 0.37 QF045_RS02960 DNA replication/repair protein RecF low > 93
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS11535 serine/threonine transporter SstT 0.56 PagCFBP13505_RS19305 DNA replication/repair protein RecF low > 74
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS10520 serine/threonine transporter SstT 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS10520 serine/threonine transporter SstT 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2230 Sodium:dicarboxylate symporter 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF low > 103
Pseudomonas sp. S08-1 0.64 OH686_04635 Serine/threonine:Na+ symporter SstT 0.38 OH686_12620 DNA recombination and repair protein RecF low > 80
Pseudomonas putida KT2440 0.64 PP_2443 Serine/threonine transporter SstT 0.37 PP_0012 DNA replication and repair protein low > 96
Erwinia tracheiphila SCR3 0.62 LU632_RS02310 sstT serine/threonine transporter SstT 0.55 LU632_RS00015 recF DNA replication/repair protein RecF low > 73
Pseudomonas stutzeri RCH2 0.62 Psest_2478 Na+/serine symporter 0.38 Psest_0004 recF protein low > 67
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_06600 sstT serine/threonine transporter SstT 0.56 IJEDHG_09800 recF DNA replication/repair protein RecF low > 61
Erwinia amylovora T8 0.60 OLJFJH_02205 serine/threonine transporter SstT 0.57 OLJFJH_05150 DNA replication/repair protein RecF low > 58
Acinetobacter radioresistens SK82 0.56 MPMX26_01492 Serine/threonine transporter SstT 0.30 MPMX26_00003 DNA replication and repair protein RecF low > 36
Acinetobacter baumannii LAC-4 0.55 RR41_RS11960 serine/threonine transporter SstT 0.29 RR41_RS00015 DNA replication/repair protein RecF low > 55
Phocaeicola dorei CL03T12C01 0.09 ABI39_RS14345 dicarboxylate/amino acid:cation symporter 0.16 ABI39_RS13135 DNA replication and repair protein RecF low > 72

Not shown: 2 genomes with orthologs for CSW01_14230 only; 45 genomes with orthologs for CSW01_00065 only