Conservation of cofitness between CA265_RS13160 and CA265_RS14310 in Pedobacter sp. GW460-11-11-14-LB5

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pedobacter sp. GW460-11-11-14-LB5 1.0 CA265_RS13160 cytochrome ubiquinol oxidase subunit I 1.0 CA265_RS14310 cadmium-translocating P-type ATPase 0.45 7
Echinicola vietnamensis KMM 6221, DSM 17526 0.71 Echvi_2339 Cytochrome bd-type quinol oxidase, subunit 1 0.60 Echvi_4457 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase low > 79
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU3271 cydA cytochrome d ubiquinol oxidase, subunit I (TIGR) 0.17 DVU2800 heavy metal translocating P-type ATPase (TIGR) low > 55
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS24095 membrane protein 0.29 BPHYT_RS00130 ATPase P low > 109
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS22220 cytochrome ubiquinol oxidase subunit I 0.17 ABZR88_RS09650 cation-translocating P-type ATPase
Phaeobacter inhibens DSM 17395 0.29 PGA1_c19670 cytochrome d ubiquinol oxidase subunit 1 0.27 PGA1_c29910 lead, cadmium, zinc and mercury-transporting ATPase 0.27 3
Pseudomonas sp. RS175 0.28 PFR28_03801 Cytochrome bd-I ubiquinol oxidase subunit 1 0.27 PFR28_04824 Cadmium-transporting ATPase 0.22 82
Azospirillum brasilense Sp245 0.28 AZOBR_RS21515 cytochrome D ubiquinol oxidase subunit I 0.24 AZOBR_RS26655 ATPase low > 97
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_3865 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10) 0.24 Ga0059261_3033 ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase low > 68
Azospirillum sp. SherDot2 0.28 MPMX19_05024 Cytochrome bd-II ubiquinol oxidase subunit 1 0.25 MPMX19_06375 Zinc/cadmium/lead-transporting P-type ATPase low > 112
Sinorhizobium meliloti 1021 0.27 SMc02255 quinol oxidase subunit I transmembrane protein 0.25 SMc04128 heavy metal transporting ATPase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4254 putative Cytochrome bd2, subunit I 0.24 GFF536 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 78
Klebsiella michiganensis M5al 0.27 BWI76_RS13395 cytochrome D ubiquinol oxidase subunit I 0.27 BWI76_RS26425 zinc/cadmium/mercury/lead-transporting ATPase low > 92
Enterobacter sp. TBS_079 0.27 MPMX20_02427 hypothetical protein 0.25 MPMX20_04346 Zinc/cadmium/lead-transporting P-type ATPase low > 85
Rhodopseudomonas palustris CGA009 0.27 TX73_024910 cytochrome ubiquinol oxidase subunit I 0.25 TX73_016855 heavy metal translocating P-type ATPase low > 86
Enterobacter asburiae PDN3 0.26 EX28DRAFT_1023 Cytochrome bd-type quinol oxidase, subunit 1 0.26 EX28DRAFT_4303 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase low > 76
Rhodospirillum rubrum S1H 0.25 Rru_A0560 Cytochrome bd ubiquinol oxidase, subunit I (NCBI) 0.22 Rru_A1027 (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (NCBI) low > 58
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_1767 cydA cytochrome oxidase d subunit I 0.19 Synpcc7942_1570 pacS Heavy metal translocating P-type ATPase low > 38
Bacteroides stercoris CC31F 0.22 HMPREF1181_RS12460 cytochrome ubiquinol oxidase subunit I 0.52 HMPREF1181_RS13985 cadmium-translocating P-type ATPase low > 56
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS04500 cytochrome ubiquinol oxidase subunit I 0.48 HMPREF1078_RS05700 heavy metal translocating P-type ATPase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.21 BT1210 cytochrome D ubiquinol oxidase subunit I (NCBI ptt file) 0.55 BT2512 cation-transporting ATPase, P-type, putative zinc-transporting ATPase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.21 BACOVA_03968 bacterial cytochrome ubiquinol oxidase 0.54 BACOVA_01601 cadmium-exporting ATPase low > 94
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS18045 cytochrome ubiquinol oxidase subunit I 0.47 HMPREF1058_RS16470 heavy metal translocating P-type ATPase low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS14370 cytochrome ubiquinol oxidase subunit I 0.47 ABI39_RS12390 heavy metal translocating P-type ATPase low > 72
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02688 Cytochrome bd-II ubiquinol oxidase subunit 1 0.25 OHPLBJKB_00234 Zinc/cadmium/lead-transporting P-type ATPase low > 73
Escherichia coli BW25113 0.20 b0978 appC cytochrome bd-II oxidase, subunit I (NCBI) 0.25 b3469 zntA zinc, cobalt and lead efflux system (NCBI) low > 76
Caulobacter crescentus NA1000 0.20 CCNA_00800 cytochrome bd-type quinol oxidase, subunit 1 cydA 0.23 CCNA_02811 heavy metal translocating P-type ATPase low > 66
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_00800 cytochrome bd-type quinol oxidase, subunit 1 cydA 0.23 CCNA_02811 heavy metal translocating P-type ATPase low > 67
Escherichia coli BL21 0.20 ECD_00981 cytochrome bd-II oxidase, subunit I 0.25 ECD_03318 zinc, cobalt and lead efflux system low > 61
Escherichia coli ECRC98 0.19 JDDGAC_08390 appC cytochrome bd-II oxidase subunit 1 0.25 JDDGAC_20305 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 86
Escherichia coli ECRC101 0.19 MCAODC_24165 appC cytochrome bd-II oxidase subunit 1 0.25 MCAODC_07205 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 87
Escherichia coli ECRC100 0.19 OKFHMN_04780 appC cytochrome bd-II oxidase subunit 1 0.25 OKFHMN_16675 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 80
Escherichia coli ECRC102 0.19 NIAGMN_23070 appC cytochrome bd-II oxidase subunit 1 0.25 NIAGMN_14445 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC99 0.19 KEDOAH_22965 appC cytochrome bd-II oxidase subunit 1 0.25 KEDOAH_11465 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECOR27 0.19 NOLOHH_21685 appC cytochrome bd-II oxidase subunit 1 0.25 NOLOHH_08480 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 75
Escherichia coli Nissle 1917 0.19 ECOLIN_RS05140 cytochrome bd-II oxidase subunit 1 0.25 ECOLIN_RS19835 Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia fergusonii Becca 0.19 EFB2_03093 Cytochrome bd-II ubiquinol oxidase subunit 1 0.25 EFB2_00347 Zinc/cadmium/lead-transporting P-type ATPase low > 86
Escherichia coli ECRC62 0.19 BNILDI_19850 appC cytochrome bd-II oxidase subunit 1 0.25 BNILDI_03035 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 75
Escherichia coli ECOR38 0.19 HEPCGN_23390 appC cytochrome bd-II oxidase subunit 1 0.25 HEPCGN_15505 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 87
Castellaniella sp019104865 MT123 0.18 ABCV34_RS14400 cytochrome ubiquinol oxidase subunit I 0.28 ABCV34_RS08945 heavy metal translocating P-type ATPase low > 48

Not shown: 52 genomes with orthologs for CA265_RS13160 only; 6 genomes with orthologs for CA265_RS14310 only