Conservation of cofitness between BPHYT_RS24690 and BPHYT_RS17695 in Burkholderia phytofirmans PsJN

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS24690 ionic transporter y4hA 1.0 BPHYT_RS17695 membrane protein 0.41 16
Paraburkholderia bryophila 376MFSha3.1 0.84 H281DRAFT_05410 Ca2+:H+ antiporter 0.98 H281DRAFT_05656 multiple antibiotic resistance protein low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_006421 Ca2+:H+ antiporter 0.97 ABIE53_003698 multiple antibiotic resistance protein low > 113
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS17030 ionic transporter y4hA 0.68 ABZR87_RS02485 MarC family protein low > 80
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS08620 ionic transporter y4hA 0.87 QEN71_RS27850 MarC family protein low > 153
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS27465 ionic transporter y4hA 0.66 RR42_RS18900 membrane protein low > 128
Xanthobacter sp. DMC5 0.36 GFF227 Sodium-potassium/proton antiporter ChaA 0.25 GFF1576 hypothetical protein — —
Rhizobium sp. OAE497 0.33 ABIE40_RS23890 calcium:proton antiporter 0.30 ABIE40_RS09370 MarC family protein low > 107
Shewanella oneidensis MR-1 0.31 SO1001 chaA calcium/proton antiporter (NCBI ptt file) 0.37 SO2137 conserved hypothetical protein TIGR00427 (NCBI ptt file) low > 76
Bosea sp. OAE506 0.31 ABIE41_RS06070 calcium:proton antiporter 0.26 ABIE41_RS15150 MarC family protein — —
Shewanella sp. ANA-3 0.30 Shewana3_3290 sodium/calcium exchanger membrane region (RefSeq) 0.37 Shewana3_1789 hypothetical protein (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS17360 sodium-potassium/proton antiporter ChaA 0.40 PagCFBP13505_RS02900 YchE family NAAT transporter low > 74
Pantoea sp. MT58 0.30 IAI47_11245 sodium-potassium/proton antiporter ChaA 0.40 IAI47_09060 YchE family NAAT transporter low > 76
Pectobacterium carotovorum WPP14 0.30 HER17_RS09735 sodium-potassium/proton antiporter ChaA 0.24 HER17_RS05025 MarC family NAAT transporter low > 75
Erwinia tracheiphila SCR3 0.30 LU632_RS10760 chaA sodium-potassium/proton antiporter ChaA 0.41 LU632_RS12890 YchE family NAAT transporter low > 74
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_25660 chaA sodium-potassium/proton antiporter ChaA 0.41 IJEDHG_22725 YchE family NAAT transporter low > 61
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF5243 putative calcium/proton antiporter 0.47 GFF1820 Multiple antibiotic resistance protein marC — —
Serratia liquefaciens MT49 0.29 IAI46_15690 sodium-potassium/proton antiporter ChaA 0.40 IAI46_14215 YchE family NAAT transporter low > 86
Erwinia amylovora T8 0.29 OLJFJH_14870 sodium-potassium/proton antiporter ChaA 0.40 OLJFJH_13390 YchE family NAAT transporter low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF2769 Calcium/proton antiporter 0.38 GFF2748 Putative membrane protein low > 78
Enterobacter sp. TBS_079 0.29 MPMX20_02631 Sodium-potassium/proton antiporter ChaA 0.41 MPMX20_02588 hypothetical protein low > 85
Klebsiella pneumoniae MKP103 0.29 KDGMDA_24635 sodium-potassium/proton antiporter ChaA 0.41 KDGMDA_24480 YchE family NAAT transporter low > 95
Dickeya dianthicola ME23 0.29 DZA65_RS12745 sodium-potassium/proton antiporter ChaA 0.40 DZA65_RS10850 YchE family NAAT transporter low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS17410 sodium-potassium/proton antiporter ChaA 0.39 BWI76_RS17245 hypothetical protein low > 92
Dickeya dianthicola 67-19 0.29 HGI48_RS12305 sodium-potassium/proton antiporter ChaA 0.40 HGI48_RS10375 YchE family NAAT transporter low > 71
Escherichia fergusonii Becca 0.29 EFB2_02710 Sodium-potassium/proton antiporter ChaA 0.38 EFB2_02685 hypothetical protein low > 86
Escherichia coli BW25113 0.29 b1216 chaA calcium/sodium:proton antiporter (NCBI) 0.38 b1242 ychE predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.29 HEPCGN_24955 chaA sodium-potassium/proton antiporter ChaA 0.38 HEPCGN_25080 ychE NAAT family transporter YchE low > 88
Escherichia coli Nissle 1917 0.29 ECOLIN_RS07350 sodium-potassium/proton antiporter ChaA 0.38 ECOLIN_RS07505 NAAT family transporter YchE — —
Escherichia coli ECRC99 0.28 KEDOAH_25490 chaA sodium-potassium/proton antiporter ChaA 0.38 KEDOAH_25610 ychE NAAT family transporter YchE — —
Escherichia coli ECRC102 0.28 NIAGMN_27740 chaA sodium-potassium/proton antiporter ChaA 0.38 NIAGMN_27620 ychE NAAT family transporter YchE low > 80
Dickeya dadantii 3937 0.28 DDA3937_RS12215 sodium-potassium/proton antiporter ChaA 0.39 DDA3937_RS10370 YchE family NAAT transporter low > 74
Escherichia coli ECRC98 0.28 JDDGAC_06080 chaA sodium-potassium/proton antiporter ChaA 0.38 JDDGAC_05960 ychE NAAT family transporter YchE low > 87
Escherichia coli ECRC101 0.28 MCAODC_21765 chaA sodium-potassium/proton antiporter ChaA 0.38 MCAODC_21645 ychE NAAT family transporter YchE low > 88
Escherichia coli ECRC100 0.28 OKFHMN_28495 chaA sodium-potassium/proton antiporter ChaA 0.38 OKFHMN_28615 ychE NAAT family transporter YchE low > 79
Escherichia coli ECOR27 0.28 NOLOHH_20560 chaA sodium-potassium/proton antiporter ChaA 0.38 NOLOHH_20435 ychE NAAT family transporter YchE low > 76
Escherichia coli BL21 0.28 ECD_01194 calcium/sodium:proton antiporter 0.38 ECD_01216 UPF0056 family inner membrane protein — —
Escherichia coli ECRC62 0.28 BNILDI_18710 chaA sodium-potassium/proton antiporter ChaA 0.38 BNILDI_18580 ychE NAAT family transporter YchE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02468 Sodium-potassium/proton antiporter ChaA 0.38 OHPLBJKB_02443 hypothetical protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3474 Calcium/proton antiporter 0.22 Pf6N2E2_3525 membrane protein, MarC family low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_0668 Sodium/calcium exchanger membrane region 0.23 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein low > 86
Rahnella sp. WP5 0.28 EX31_RS09385 sodium-potassium/proton antiporter ChaA 0.40 EX31_RS10070 YchE family NAAT transporter low > 89
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_0668 Sodium/calcium exchanger membrane region 0.23 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08010 calcium:proton antiporter 0.22 AO356_08255 hypothetical protein low > 104
Enterobacter asburiae PDN3 0.27 EX28DRAFT_0835 calcium/proton exchanger 0.39 EX28DRAFT_0866 membrane protein, MarC family low > 76
Pseudomonas fluorescens SBW25 0.27 PFLU_RS03290 calcium:proton antiporter 0.23 PFLU_RS03000 MarC family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS03290 calcium:proton antiporter 0.23 PFLU_RS03000 MarC family protein low > 109
Pseudomonas simiae WCS417 0.27 PS417_03210 calcium:proton antiporter 0.23 PS417_02925 membrane protein low > 88
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_00857 Sodium-potassium/proton antiporter ChaA 0.23 GEMAOFIL_00817 hypothetical protein low > 93
Pseudomonas sp. RS175 0.26 PFR28_05254 Sodium-potassium/proton antiporter ChaA 0.23 PFR28_05211 hypothetical protein low > 88
Agrobacterium fabrum C58 0.25 Atu2195 Ca2+/H+ antiporter 0.28 Atu1508 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.22 SMc02224 calcium/proton antiporter transmembrane protein 0.30 SMc01232 hypothetical protein low > 103
Methylophilus sp. DMC18 0.21 GFF2653 Sodium-potassium/proton antiporter ChaA 0.46 GFF2552 hypothetical protein low > 43

Not shown: 1 genomes with orthologs for BPHYT_RS24690 only; 46 genomes with orthologs for BPHYT_RS17695 only