Conservation of cofitness between BPHYT_RS18625 and BPHYT_RS16710 in Burkholderia phytofirmans PsJN

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS18625 allophanate hydrolase 1.0 BPHYT_RS16710 LysR family transcriptional regulator 0.34 16
Paraburkholderia graminis OAS925 0.92 ABIE53_000047 KipI family sensor histidine kinase inhibitor 0.96 ABIE53_003512 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_05813 sensor histidine kinase inhibitor, KipI family 0.97 H281DRAFT_04272 transcriptional regulator, LysR family — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS28650 5-oxoprolinase subunit PxpB 0.88 QEN71_RS26895 LysR substrate-binding domain-containing protein low > 153
Variovorax sp. SCN45 0.63 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.53 GFF4595 Transcriptional regulator low > 127
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS15335 5-oxoprolinase subunit PxpB 0.60 ABZR87_RS07510 LysR family transcriptional regulator low > 80
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS08790 hypothetical protein 0.61 HSERO_RS19265 LysR family transcriptional regulator low > 78
Ralstonia solanacearum GMI1000 0.61 RS_RS10895 hypothetical protein 0.60 RS_RS02375 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.61 RPSI07_RS13780 allophanate hydrolase 0.60 RPSI07_RS21665 LysR family transcriptional regulator low > 81
Variovorax sp. OAS795 0.61 ABID97_RS23850 5-oxoprolinase subunit PxpB 0.53 ABID97_RS05925 LysR substrate-binding domain-containing protein low > 91
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS00640 allophanate hydrolase 0.57 RR42_RS02565 LysR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS03435 allophanate hydrolase 0.60 RALBFv3_RS11545 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.58 UW163_RS10235 allophanate hydrolase 0.60 UW163_RS02040 LysR family transcriptional regulator — —
Dickeya dianthicola ME23 0.55 DZA65_RS06805 5-oxoprolinase subunit PxpB 0.21 DZA65_RS15905 LysR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS06415 5-oxoprolinase subunit PxpB 0.19 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT low > 74
Dickeya dianthicola 67-19 0.54 HGI48_RS06460 5-oxoprolinase subunit PxpB 0.20 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT low > 71
Pectobacterium carotovorum WPP14 0.53 HER17_RS14985 5-oxoprolinase subunit PxpB 0.18 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Klebsiella michiganensis M5al 0.52 BWI76_RS08350 carboxylase 0.19 BWI76_RS17610 LysR family transcriptional regulator low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03006 putative protein YbgJ 0.23 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE low > 73
Escherichia coli BW25113 0.52 b0711 ybgJ predicted enzyme subunit (NCBI) 0.23 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli BL21 0.52 ECD_00671 putative allophanate hydrolase, subunit 1 0.23 ECD_04196 hypochlorite-responsive transcription factor low > 61
Escherichia coli Nissle 1917 0.52 ECOLIN_RS03805 5-oxoprolinase subunit PxpB 0.23 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT low > 55
Escherichia fergusonii Becca 0.52 EFB2_03392 5-oxoprolinase subunit B 0.23 EFB2_04117 HTH-type transcriptional regulator YjiE 0.47 4
Escherichia coli ECOR27 0.52 NOLOHH_23390 pxpB 5-oxoprolinase subunit PxpB 0.23 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Escherichia coli ECOR38 0.52 HEPCGN_01205 pxpB 5-oxoprolinase subunit PxpB 0.23 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 87
Escherichia coli ECRC62 0.52 BNILDI_21385 pxpB 5-oxoprolinase subunit PxpB 0.23 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4616 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.24 GFF984 LysR family transcriptional regulator QseA low > 78
Rahnella sp. WP5 0.50 EX31_RS23385 5-oxoprolinase subunit PxpB 0.27 EX31_RS05520 LysR family transcriptional regulator low > 89
Pseudomonas fluorescens SBW25 0.42 PFLU_RS19655 5-oxoprolinase subunit PxpB 0.32 PFLU_RS29810 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS19655 5-oxoprolinase subunit PxpB 0.32 PFLU_RS29810 LysR family transcriptional regulator low > 109
Agrobacterium fabrum C58 0.41 Atu4275 hypothetical protein 0.32 Atu2512 transcriptional regulator, LysR family low > 89
Pseudomonas sp. S08-1 0.33 OH686_08745 Allophanate hydrolase 2 subunit 1 0.29 OH686_13320 LysR-family transcriptional regulator low > 80
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_18000 allophanate hydrolase 0.31 AO353_09945 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3367 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.32 Pf1N1B4_2026 Transcriptional regulator low > 87
Pseudomonas putida KT2440 0.32 PP_4576 allophanate hydrolase subunit 0.31 PP_5337 LysR family transcriptional regulator 0.23 20
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_04330 allophanate hydrolase 0.39 AO356_01910 LysR family transcriptional regulator low > 104
Pseudomonas stutzeri RCH2 0.32 Psest_1541 TIGR00370 family protein 0.28 Psest_4073 Transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_2707 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.39 Pf6N2E2_2250 Transcriptional regulator low > 103
Pseudomonas simiae WCS417 0.30 PS417_07475 allophanate hydrolase 0.32 PS417_28125 LysR family transcriptional regulator — —
Bosea sp. OAE506 0.24 ABIE41_RS24175 allophanate hydrolase subunit 1 0.22 ABIE41_RS16420 LysR family transcriptional regulator low > 77
Dinoroseobacter shibae DFL-12 0.20 Dshi_2028 Allophanate hydrolase subunit 1 (RefSeq) 0.22 Dshi_1440 transcriptional regulator, LysR family (RefSeq) low > 64

Not shown: 17 genomes with orthologs for BPHYT_RS18625 only; 12 genomes with orthologs for BPHYT_RS16710 only