Conservation of cofitness between BPHYT_RS33780 and BPHYT_RS16085 in Burkholderia phytofirmans PsJN

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33780 glycogen branching protein 1.0 BPHYT_RS16085 DeoR faimly transcriptional regulator 0.36 13
Paraburkholderia graminis OAS925 0.94 ABIE53_004826 1,4-alpha-glucan branching enzyme 0.95 ABIE53_003391 DNA-binding transcriptional regulator LsrR (DeoR family) 0.52 40
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_06050 1,4-alpha-glucan branching enzyme 0.95 H281DRAFT_04154 DNA-binding transcriptional regulator LsrR, DeoR family
Paraburkholderia sabiae LMG 24235 0.84 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB 0.90 QEN71_RS02620 sugar-binding transcriptional regulator low > 153
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB 0.55 ABZR87_RS18695 sugar-binding transcriptional regulator low > 80
Ralstonia solanacearum GMI1000 0.61 RS_RS18305 glycogen-branching enzyme 0.81 RS_RS10675 sugar-binding transcriptional regulator low > 80
Pseudomonas fluorescens SBW25 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.13 PFLU_RS18195 sugar-binding transcriptional regulator 0.63 62
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.13 PFLU_RS18195 sugar-binding transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.60 PS417_12805 glycogen branching protein 0.13 PS417_12075 DNA-binding protein low > 88
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2491 glycogen branching enzyme 0.13 Psyr_2573 transcriptional regulator, DeoR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2491 glycogen branching enzyme 0.13 Psyr_2573 transcriptional regulator, DeoR family low > 86
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12510 glycogen branching protein 0.57 HSERO_RS02185 DeoR family transcriptional regulator
Rhizobium sp. OAE497 0.57 ABIE40_RS30590 1,4-alpha-glucan branching protein GlgB 0.37 ABIE40_RS17020 sugar-binding transcriptional regulator low > 107
Azospirillum sp. SherDot2 0.54 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB 0.20 MPMX19_03009 Erythritol catabolism regulatory protein EryD
Pectobacterium carotovorum WPP14 0.53 HER17_RS01485 1,4-alpha-glucan branching enzyme 0.14 HER17_RS17285 sugar-binding transcriptional regulator low > 75
Rhodospirillum rubrum S1H 0.53 Rru_A2576 1,4-alpha-glucan branching enzyme (NCBI) 0.22 Rru_A1366 Transcriptional Regulator, DeoR family (NCBI)
Pantoea sp. MT58 0.53 IAI47_01680 1,4-alpha-glucan branching enzyme 0.13 IAI47_11820 sugar-binding transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_04314 1,4-alpha-glucan branching enzyme GlgB 0.19 MPMX20_03992 Transcriptional regulator LsrR low > 85
Escherichia coli Nissle 1917 0.53 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme 0.15 ECOLIN_RS23220 sugar-binding transcriptional regulator low > 55
Escherichia coli ECOR38 0.53 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme 0.17 HEPCGN_26590 lsrR transcriptional regulator LsrR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB 0.17 OHPLBJKB_02207 Transcriptional regulator LsrR low > 73
Escherichia fergusonii Becca 0.53 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB 0.15 EFB2_04581 Sorbitol operon regulator low > 86
Escherichia coli ECRC99 0.53 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme 0.17 KEDOAH_27255 lsrR transcriptional regulator LsrR
Escherichia coli BW25113 0.53 b3432 glgB glycogen branching enzyme (NCBI) 0.17 b1512 lsrR lsr operon transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC100 0.53 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme 0.17 OKFHMN_01175 lsrR transcriptional regulator LsrR low > 80
Escherichia coli ECRC62 0.53 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme 0.17 BNILDI_17305 lsrR transcriptional regulator LsrR low > 75
Escherichia coli ECRC102 0.53 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme 0.17 NIAGMN_25320 lsrR transcriptional regulator LsrR
Escherichia coli ECRC101 0.53 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme 0.17 MCAODC_16750 lsrR transcriptional regulator LsrR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.19 GFF2294 LsrR, transcriptional repressor of lsr operon low > 78
Escherichia coli ECRC98 0.52 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme 0.17 JDDGAC_03680 lsrR transcriptional regulator LsrR low > 86
Escherichia coli ECOR27 0.52 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme 0.17 NOLOHH_18825 lsrR transcriptional regulator LsrR low > 75
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4115 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.19 EX28DRAFT_3150 Transcriptional regulator, contains sigma factor-related N-terminal domain low > 76
Rahnella sp. WP5 0.52 EX31_RS05025 1,4-alpha-glucan branching enzyme 0.20 EX31_RS09805 transcriptional regulator LsrR low > 89
Klebsiella michiganensis M5al 0.52 BWI76_RS26215 glycogen-branching enzyme 0.37 BWI76_RS19350 DeoR family transcriptional regulator
Agrobacterium fabrum C58 0.50 Atu4077 glycogen branching protein 0.38 Atu4446 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.50 SMc03922 glycogen branching protein 0.39 SMc01495 transcriptional regulator low > 103
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14125 1,4-alpha-glucan branching enzyme 0.14 CSW01_17315 DNA-binding protein low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.41 DVU2243 glgB 1,4-alpha-glucan branching enzyme (TIGR) 0.16 DVU3131 transcriptional regulator, putative (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_0840 glycogen branching enzyme (RefSeq) 0.17 DvMF_0812 transcriptional regulator, DeoR family (RefSeq) low > 51

Not shown: 40 genomes with orthologs for BPHYT_RS33780 only; 1 genomes with orthologs for BPHYT_RS16085 only