Conservation of cofitness between BPHYT_RS29600 and BPHYT_RS01450 in Burkholderia phytofirmans PsJN

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS29600 threonine aldolase 1.0 BPHYT_RS01450 DNA-binding protein 0.27 20
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_03052 L-threonine aldolase 0.68 H281DRAFT_02242 DNA protecting protein DprA low > 103
Paraburkholderia graminis OAS925 0.96 ABIE53_005128 threonine aldolase 0.71 ABIE53_000387 DNA processing protein 0.37 12
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS14320 low-specificity L-threonine aldolase 0.62 QEN71_RS00150 DNA-processing protein DprA low > 153
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS12390 low-specificity L-threonine aldolase 0.33 LRK54_RS10145 DNA-processing protein DprA low > 59
Rhodanobacter denitrificans MT42 0.56 LRK55_RS12125 low-specificity L-threonine aldolase 0.33 LRK55_RS09785 DNA-processing protein DprA low > 63
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_11545 ltaE low-specificity L-threonine aldolase 0.31 OKGIIK_13770 dprA DNA-processing protein DprA low > 52
Lysobacter sp. OAE881 0.56 ABIE51_RS01760 low-specificity L-threonine aldolase 0.24 ABIE51_RS02235 DNA-processing protein DprA low > 62
Serratia liquefaciens MT49 0.56 IAI46_08460 low-specificity L-threonine aldolase 0.23 IAI46_23260 DNA-protecting protein DprA low > 86
Pantoea sp. MT58 0.55 IAI47_12975 low-specificity L-threonine aldolase 0.25 IAI47_02295 DNA-protecting protein DprA low > 76
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19205 low-specificity L-threonine aldolase 0.30 ABZR86_RS13870 DNA-processing protein DprA low > 74
Variovorax sp. OAS795 0.54 ABID97_RS05265 low-specificity L-threonine aldolase 0.38 ABID97_RS01830 DNA-processing protein DprA low > 91
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_18005 low-specificity L-threonine aldolase 0.27 CSW01_00245 DNA-protecting protein DprA low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF4912 Low-specificity L-threonine aldolase (EC 4.1.2.5) 0.26 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 78
Klebsiella michiganensis M5al 0.53 BWI76_RS09550 low-specificity L-threonine aldolase 0.26 BWI76_RS25665 DNA-processing protein DprA low > 92
Escherichia coli ECRC102 0.53 NIAGMN_03890 ltaE low-specificity L-threonine aldolase 0.26 NIAGMN_15305 dprA DNA-protecting protein DprA — —
Escherichia coli ECRC101 0.53 MCAODC_25065 ltaE low-specificity L-threonine aldolase 0.26 MCAODC_08065 dprA DNA-protecting protein DprA low > 87
Escherichia coli ECRC98 0.53 JDDGAC_09485 ltaE low-specificity L-threonine aldolase 0.26 JDDGAC_21165 dprA DNA-protecting protein DprA low > 86
Shewanella loihica PV-4 0.53 Shew_1155 threonine aldolase (RefSeq) 0.25 Shew_3734 DNA protecting protein DprA (RefSeq) low > 60
Escherichia fergusonii Becca 0.53 EFB2_03191 Low specificity L-threonine aldolase 0.26 EFB2_00538 hypothetical protein low > 86
Escherichia coli ECRC99 0.53 KEDOAH_22060 ltaE low-specificity L-threonine aldolase 0.26 KEDOAH_10605 dprA DNA-protecting protein DprA — —
Variovorax sp. SCN45 0.53 GFF5893 Low-specificity L-threonine aldolase (EC 4.1.2.48) 0.35 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 127
Escherichia coli Nissle 1917 0.53 ECOLIN_RS04630 low-specificity L-threonine aldolase 0.26 ECOLIN_RS18860 DNA-protecting protein DprA low > 55
Escherichia coli BW25113 0.53 b0870 ltaE L-allo-threonine aldolase, PLP-dependent (NCBI) 0.26 b4473 smf hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.53 HEPCGN_02165 ltaE low-specificity L-threonine aldolase 0.26 HEPCGN_16365 dprA DNA-protecting protein DprA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02798 Low specificity L-threonine aldolase 0.26 OHPLBJKB_00418 hypothetical protein low > 73
Escherichia coli ECRC62 0.53 BNILDI_20500 ltaE low-specificity L-threonine aldolase 0.26 BNILDI_02185 dprA DNA-protecting protein DprA low > 75
Escherichia coli ECOR27 0.53 NOLOHH_22245 ltaE low-specificity L-threonine aldolase 0.26 NOLOHH_09335 dprA DNA-protecting protein DprA low > 75
Escherichia coli BL21 0.53 ECD_00875 L-allo-threonine aldolase, PLP-dependent 0.26 ECD_03136 DNA recombination-mediator A family protein low > 61
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF3108 Low-specificity L-threonine aldolase (EC 4.1.2.48) 0.41 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 90
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2063 L-threonine aldolase (EC 4.1.2.5) 0.26 EX28DRAFT_0042 DNA protecting protein DprA low > 76
Enterobacter sp. TBS_079 0.51 MPMX20_01531 Low specificity L-threonine aldolase 0.25 MPMX20_04193 hypothetical protein low > 85
Rahnella sp. WP5 0.51 EX31_RS18605 low-specificity L-threonine aldolase 0.25 EX31_RS15970 DNA-protecting protein DprA low > 89
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1832 L-threonine aldolase (EC 4.1.2.5) 0.29 B158DRAFT_0400 DNA protecting protein DprA low > 40
Acidovorax sp. GW101-3H11 0.49 Ac3H11_4475 Low-specificity L-threonine aldolase (EC 4.1.2.48) 0.35 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 79
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS05825 low-specificity L-threonine aldolase 0.42 ABZR87_RS04985 DNA-processing protein DprA low > 80
Rhodopseudomonas palustris CGA009 0.37 TX73_008155 threonine aldolase family protein 0.21 TX73_016135 DNA-processing protein DprA low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS02210 threonine aldolase 0.21 CA265_RS04370 DNA protecting protein DprA low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_4604 Threonine aldolase 0.20 Echvi_3854 DNA protecting protein DprA low > 79

Not shown: 19 genomes with orthologs for BPHYT_RS29600 only; 26 genomes with orthologs for BPHYT_RS01450 only