Conservation of cofitness between Atu3186 and Atu2224 in Agrobacterium fabrum C58

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3186 glycerol-3-phosphate ABC transporter permease 1.0 Atu2224 aldehyde dehydrogenase 0.21 11
Sinorhizobium meliloti 1021 0.90 SM_b20417 glycerol-3-phosphate ABC transporter permease 0.80 SMc02689 aldehyde dehydrogenase low > 103
Rhizobium sp. OAE497 0.86 ABIE40_RS20840 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.78 ABIE40_RS25730 aldehyde dehydrogenase low > 107
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS12965 glycerol-3-phosphate transporter permease 0.75 RR42_RS34255 aldehyde dehydrogenase low > 128
Ralstonia solanacearum PSI07 0.65 RPSI07_RS17795 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 RPSI07_RS09465 aldehyde dehydrogenase low > 81
Ralstonia solanacearum UW163 0.65 UW163_RS13020 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 UW163_RS05810 aldehyde dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS15560 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 RALBFv3_RS07815 aldehyde dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS06340 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 RS_RS15715 aldehyde dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS11090 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 ABZR87_RS15990 aldehyde dehydrogenase family protein low > 80
Castellaniella sp019104865 MT123 0.62 ABCV34_RS03600 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.69 ABCV34_RS02705 aldehyde dehydrogenase family protein low > 48
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4787 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.70 Ac3H11_4393 Aldehyde dehydrogenase (EC 1.2.1.3) low > 79
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS17460 glycerol-3-phosphate transporter permease 0.75 BPHYT_RS00120 aldehyde dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.61 ABIE53_003652 sn-glycerol 3-phosphate transport system permease protein 0.76 ABIE53_000363 aldehyde dehydrogenase low > 113
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS18950 glycerol-3-phosphate transporter permease 0.73 HSERO_RS09465 aldehyde dehydrogenase low > 78
Variovorax sp. OAS795 0.61 ABID97_RS07225 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.75 ABID97_RS15020 aldehyde dehydrogenase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_05703 glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family 0.76 H281DRAFT_02299 aldehyde dehydrogenase low > 103
Variovorax sp. SCN45 0.60 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.77 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1260 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.70 GFF5395 Aldehyde dehydrogenase (EC 1.2.1.3) low > 90
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS27610 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.75 QEN71_RS00050 aldehyde dehydrogenase family protein low > 153
Azospirillum sp. SherDot2 0.58 MPMX19_00484 sn-glycerol-3-phosphate transport system permease protein UgpA 0.74 MPMX19_05663 Aldehyde dehydrogenase low > 112
Dinoroseobacter shibae DFL-12 0.58 Dshi_2015 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.74 Dshi_1095 aldehyde dehydrogenase (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.58 TX73_000295 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 TX73_006195 aldehyde dehydrogenase low > 86
Klebsiella michiganensis M5al 0.54 BWI76_RS26300 glycerol-3-phosphate transporter permease 0.67 BWI76_RS21985 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 92
Serratia liquefaciens MT49 0.53 IAI46_00995 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.66 IAI46_12315 aldehyde dehydrogenase low > 86
Escherichia coli ECOR27 0.53 NOLOHH_08565 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 NOLOHH_07755 aldB aldehyde dehydrogenase AldB 0.55 18
Escherichia coli ECRC62 0.53 BNILDI_02940 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 BNILDI_03775 aldB aldehyde dehydrogenase AldB low > 75
Escherichia coli ECRC102 0.53 NIAGMN_14545 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 NIAGMN_13625 aldB aldehyde dehydrogenase AldB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00251 sn-glycerol-3-phosphate transport system permease protein UgpA 0.72 OHPLBJKB_00115 Aldehyde dehydrogenase B low > 73
Pantoea sp. MT58 0.53 IAI47_01595 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.64 IAI47_11705 aldehyde dehydrogenase low > 76
Escherichia coli ECOR38 0.53 HEPCGN_15595 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 HEPCGN_14700 aldB aldehyde dehydrogenase AldB low > 87
Escherichia coli BW25113 0.53 b3452 ugpA glycerol-3-phosphate transporter subunit (NCBI) 0.72 b3588 aldB aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS) low > 76
Escherichia coli ECRC99 0.53 KEDOAH_11365 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 KEDOAH_12285 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC101 0.53 MCAODC_07305 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 MCAODC_06380 aldB aldehyde dehydrogenase AldB low > 87
Pectobacterium carotovorum WPP14 0.53 HER17_RS00615 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 HER17_RS21100 aldehyde dehydrogenase low > 75
Escherichia coli ECRC100 0.53 OKFHMN_16775 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 OKFHMN_15865 aldB aldehyde dehydrogenase AldB low > 80
Escherichia coli ECRC98 0.53 JDDGAC_20405 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 JDDGAC_19495 aldB aldehyde dehydrogenase AldB low > 86
Escherichia coli BL21 0.53 ECD_03301 sn-glycerol-3-phosphate ABC transporter permease 0.72 ECD_03443 aldehyde dehydrogenase B low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF556 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.72 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) low > 78
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4284 ABC-type sugar transport systems, permease components 0.72 EX28DRAFT_3843 NAD-dependent aldehyde dehydrogenases low > 76
Rahnella sp. WP5 0.53 EX31_RS14755 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.70 EX31_RS05750 aldehyde dehydrogenase low > 89
Enterobacter sp. TBS_079 0.53 MPMX20_04328 sn-glycerol-3-phosphate transport system permease protein UgpA 0.72 MPMX20_00142 Aldehyde dehydrogenase B low > 85
Escherichia coli Nissle 1917 0.53 ECOLIN_RS19740 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 ECOLIN_RS26555 aldehyde dehydrogenase AldB — —
Escherichia fergusonii Becca 0.52 EFB2_00370 sn-glycerol-3-phosphate transport system permease protein UgpA 0.72 EFB2_00222 Aldehyde dehydrogenase B low > 86
Dickeya dianthicola 67-19 0.51 HGI48_RS20645 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 HGI48_RS00300 aldehyde dehydrogenase low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS00725 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 DDA3937_RS20950 aldehyde dehydrogenase low > 74
Dickeya dianthicola ME23 0.51 DZA65_RS21660 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.72 DZA65_RS00295 aldehyde dehydrogenase low > 75

Not shown: 2 genomes with orthologs for Atu3186 only; 36 genomes with orthologs for Atu2224 only