Conservation of cofitness between Atu4615 and Atu0978 in Agrobacterium fabrum C58

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4615 glucose-1-phosphate thymidylyltransferase 1.0 Atu0978 two component response regulator 0.56 16
Caulobacter crescentus NA1000 Δfur 0.76 CCNA_01199 glucose-1-phosphate thymidylyltransferase 0.55 CCNA_02845 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.76 CCNA_01199 glucose-1-phosphate thymidylyltransferase 0.55 CCNA_02845 two-component response regulator low > 66
Rhizobium sp. OAE497 0.76 ABIE40_RS08660 glucose-1-phosphate thymidylyltransferase RfbA 0.85 ABIE40_RS05700 response regulator transcription factor low > 107
Bosea sp. OAE506 0.76 ABIE41_RS02865 glucose-1-phosphate thymidylyltransferase RfbA 0.67 ABIE41_RS21440 response regulator transcription factor low > 77
Rhodopseudomonas palustris CGA009 0.73 TX73_000620 glucose-1-phosphate thymidylyltransferase RfbA 0.68 TX73_009945 response regulator transcription factor low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.71 GFF1839 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.45 GFF1757 response regulator in two-component regulatory system with PhoQ low > 90
Azospirillum sp. SherDot2 0.69 MPMX19_06727 Glucose-1-phosphate thymidylyltransferase 1 0.60 MPMX19_00794 Transcriptional activator protein CopR — —
Variovorax sp. SCN45 0.69 GFF6880 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.44 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family — —
Enterobacter sp. TBS_079 0.66 MPMX20_03012 Glucose-1-phosphate thymidylyltransferase 1 0.42 MPMX20_02319 Transcriptional regulatory protein CusR low > 85
Marinobacter adhaerens HP15 0.65 HP15_p187g50 glucose-1-phosphate thymidylyltransferase 1 0.59 HP15_3484 DNA-binding response regulator — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_0527 glucose-1-phosphate thymidylyltransferase, short form 0.41 EX28DRAFT_1165 heavy metal response regulator — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS18730 glucose-1-phosphate thymidylyltransferase RfbA 0.46 ABZR86_RS12570 response regulator transcription factor low > 74
Lysobacter sp. OAE881 0.64 ABIE51_RS15615 glucose-1-phosphate thymidylyltransferase RfbA 0.53 ABIE51_RS04165 response regulator transcription factor low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.64 CA265_RS19325 glucose-1-phosphate thymidylyltransferase 0.36 CA265_RS03060 DNA-binding response regulator — —
Rhodospirillum rubrum S1H 0.64 Rru_B0048 Glucose-1-phosphate thymidylyltransferase, long form (NCBI) 0.56 Rru_A2913 Two component Transcriptional regulator, Winged helix family (NCBI) — —
Dickeya dianthicola ME23 0.64 DZA65_RS07115 glucose-1-phosphate thymidylyltransferase RfbA 0.42 DZA65_RS03595 copper/silver response regulator transcription factor SilR low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS06760 glucose-1-phosphate thymidylyltransferase RfbA 0.42 HGI48_RS03485 heavy metal response regulator transcription factor low > 71
Sinorhizobium meliloti 1021 0.63 SM_b21324 glucose-1-phosphate thymidylyltransferase 0.81 SMc02366 transcriptional regulator 0.27 42
Desulfovibrio vulgaris Hildenborough JW710 0.63 DVU0925 rfbA glucose-1-phosphate thymidylyltransferase (TIGR) 0.28 DVU2588 trcR DNA-binding response regulator (TIGR) — —
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_01170 rfbA glucose-1-phosphate thymidylyltransferase RfbA 0.46 OKGIIK_04905 DNA-binding response regulator low > 52
Azospirillum brasilense Sp245 0.63 AZOBR_RS33425 glucose-1-phosphate thymidylyltransferase 0.59 AZOBR_RS10800 XRE family transcriptional regulator low > 97
Pontibacter actiniarum KMM 6156, DSM 19842 0.63 CA264_17920 glucose-1-phosphate thymidylyltransferase 0.38 CA264_02615 DNA-binding response regulator — —
Shewanella oneidensis MR-1 0.63 SO3186 rfbA glucose-1-phosphate-thymidylyltransferase (NCBI ptt file) 0.46 SO4428 DNA-binding response regulator (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.63 Shew_1402 glucose-1-phosphate thymidylyltransferase (RefSeq) 0.47 Shew_0097 two component transcriptional regulator (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS17485 glucose-1-phosphate thymidylyltransferase RfbA 0.35 ABZR88_RS15000 response regulator transcription factor — —
Alteromonas macleodii MIT1002 0.63 MIT1002_03560 Glucose-1-phosphate thymidylyltransferase 1 0.46 MIT1002_03097 Transcriptional activator protein CopR — —
Shewanella sp. ANA-3 0.62 Shewana3_1380 glucose-1-phosphate thymidylyltransferase (RefSeq) 0.46 Shewana3_0282 two component transcriptional regulator (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.62 Echvi_2361 glucose-1-phosphate thymidylyltransferase, short form 0.35 Echvi_2622 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain — —
Bacteroides ovatus ATCC 8483 0.61 BACOVA_01444 glucose-1-phosphate thymidylyltransferase 0.33 BACOVA_02385 response regulator receiver domain protein — —
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2017 glucose-1-phosphate thymidylyltransferase (NCBI ptt file) 0.33 BT0682 two-component system response regulator (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.61 Sama_2240 glucose-1-phosphate thymidylyltransferase (RefSeq) 0.44 Sama_3534 response regulator receiver protein (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.61 AMB_RS00300 glucose-1-phosphate thymidylyltransferase 0.59 AMB_RS14570 DNA-binding response regulator — —
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS12045 glucose-1-phosphate thymidylyltransferase RfbA 0.35 ABI39_RS05370 response regulator transcription factor low > 72
Parabacteroides merdae CL09T00C40 0.59 HMPREF1078_RS00175 glucose-1-phosphate thymidylyltransferase RfbA 0.38 HMPREF1078_RS01665 response regulator transcription factor — —
Mycobacterium tuberculosis H37Rv 0.58 Rv0334 Alpha-D-glucose-1-phosphate thymidylyltransferase RmlA (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) 0.34 Rv0602c Two component DNA binding transcriptional regulatory protein TcrA — —

Not shown: 59 genomes with orthologs for Atu4615 only; 1 genomes with orthologs for Atu0978 only