Conservation of cofitness between AO356_07175 and AO356_15320 in Pseudomonas fluorescens FW300-N2C3

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_07175 glucarate transporter 1.0 AO356_15320 lytic transglycosylase 0.32 6
Pseudomonas fluorescens FW300-N2E2 1.00 Pf6N2E2_3297 D-galactarate permease 0.98 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas sp. RS175 0.99 PFR28_00144 putative glucarate transporter 0.98 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88
Pseudomonas fluorescens SBW25 0.96 PFLU_RS04245 MFS transporter 0.88 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS04245 MFS transporter 0.88 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas simiae WCS417 0.95 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.89 PS417_24715 lytic transglycosylase low > 88
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_5043 D-galactarate permease 0.93 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1108 D-galactarate permease 0.94 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_05295 glucarate transporter 0.94 AO353_06465 lytic transglycosylase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4226 D-galactonate transporter 0.88 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4226 D-galactonate transporter 0.88 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas putida KT2440 0.82 PP_3600 glucarate transporter 0.86 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS15805 glucarate transporter 0.40 HSERO_RS04945 murein transglycosylase low > 78
Klebsiella michiganensis M5al 0.67 BWI76_RS22835 MFS transporter 0.41 BWI76_RS22210 murein transglycosylase B low > 92
Escherichia fergusonii Becca 0.67 EFB2_01128 putative glucarate transporter 0.41 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Escherichia coli BL21 0.67 ECD_02634 putative D-glucarate transporter 0.41 ECD_02551 membrane-bound lytic murein transglycosylase B low > 61
Escherichia coli BW25113 0.67 b2789 gudP predicted D-glucarate transporter (NCBI) 0.41 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.41 ECOLIN_RS15070 lytic murein transglycosylase B — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS04075 MFS transporter 0.41 HER17_RS16185 lytic murein transglycosylase B low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4843 D-glucarate permease 0.41 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS29085 glucarate transporter 0.38 RR42_RS04540 lytic transglycosylase low > 128
Rahnella sp. WP5 0.66 EX31_RS03160 MFS transporter 0.40 EX31_RS07810 lytic murein transglycosylase B low > 89
Dickeya dadantii 3937 0.65 DDA3937_RS17055 MFS transporter 0.39 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Erwinia tracheiphila SCR3 0.65 LU632_RS06310 MFS transporter 0.38 LU632_RS15745 mltB lytic murein transglycosylase B low > 74
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2870 D-galactonate transporter 0.41 EX28DRAFT_2790 lytic murein transglycosylase B low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS21080 MFS transporter 0.33 RS_RS04565 lytic murein transglycosylase B low > 80
Dickeya dianthicola ME23 0.64 DZA65_RS18185 MFS transporter 0.39 DZA65_RS03910 lytic murein transglycosylase B low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS17110 MFS transporter 0.39 HGI48_RS03780 lytic murein transglycosylase B low > 71
Pantoea sp. MT58 0.64 IAI47_04080 MFS transporter 0.41 IAI47_04275 lytic murein transglycosylase B low > 76
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS20330 MFS transporter 0.35 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Ralstonia solanacearum PSI07 0.64 RPSI07_RS03475 MFS transporter 0.33 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Enterobacter sp. TBS_079 0.64 MPMX20_03659 putative glucarate transporter 0.41 MPMX20_03585 Membrane-bound lytic murein transglycosylase B low > 85
Ralstonia solanacearum UW163 0.64 UW163_RS19435 MFS transporter 0.33 UW163_RS15980 lytic murein transglycosylase B — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS19740 MFS transporter 0.33 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Paraburkholderia graminis OAS925 0.63 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.34 ABIE53_003143 membrane-bound lytic murein transglycosylase B low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS24150 glucarate transporter 0.35 BPHYT_RS14840 lytic transglycosylase low > 109

Not shown: 14 genomes with orthologs for AO356_07175 only; 16 genomes with orthologs for AO356_15320 only