Conservation of cofitness between AO353_00310 and AO353_10035 in Pseudomonas fluorescens FW300-N2E3

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_00310 transaldolase 1.0 AO353_10035 LysR family transcriptional regulator 0.71 4
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.93 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 0.71 2
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.95 PfGW456L13_727 LysR family transcriptional regulator PA5437 0.51 46
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07805 transaldolase 0.91 PFLU_RS29885 LysR family transcriptional regulator 0.70 35
Pseudomonas simiae WCS417 0.91 PS417_07730 transaldolase 0.92 PS417_28220 LysR family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07805 transaldolase 0.91 PFLU_RS29885 LysR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.91 PFR28_01142 Transaldolase 0.93 PFR28_04519 HTH-type transcriptional activator CmpR low > 88
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.91 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 0.53 8
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_02175 transaldolase 0.92 AO356_12015 LysR family transcriptional regulator 0.61 46
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_1914 transaldolase 0.82 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_1914 transaldolase 0.82 Psyr_5062 transcriptional regulator, LysR family 0.62 34
Pseudomonas putida KT2440 0.78 PP_2168 Transaldolase 0.86 PP_5348 Transcriptional regulator, LysR family 0.57 40
Pseudomonas stutzeri RCH2 0.78 Psest_2708 transaldolase 0.73 Psest_4086 Transcriptional regulator low > 67
Pseudomonas sp. S08-1 0.77 OH686_22740 transaldolase 0.70 OH686_13195 Transcriptional regulator, LysR family low > 80
Shewanella amazonensis SB2B 0.63 Sama_0913 transaldolase B (RefSeq) 0.25 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.62 SO3546 tal transaldolase (NCBI ptt file) 0.24 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) — —
Shewanella sp. ANA-3 0.61 Shewana3_3147 transaldolase B (RefSeq) 0.24 Shewana3_0835 LysR family transcriptional regulator (RefSeq) — —
Shewanella loihica PV-4 0.60 Shew_1089 transaldolase B (RefSeq) 0.34 Shew_1245 LysR family transcriptional regulator (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1363 Transaldolase (EC 2.2.1.2) 0.32 GFF2192 Cys regulon transcriptional activator CysB low > 90
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.33 Ac3H11_3174 RuBisCO operon transcriptional regulator low > 79
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24595 transaldolase 0.34 QEN71_RS32870 LysR family transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS13050 transaldolase 0.31 RR42_RS31340 transcriptional regulator low > 128
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS06045 transaldolase 0.33 BPHYT_RS29890 LysR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.55 ABIE53_001416 transaldolase 0.34 ABIE53_005077 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00286 transaldolase 0.34 H281DRAFT_03013 transcriptional regulator, LysR family low > 103
Synechococcus elongatus PCC 7942 0.54 Synpcc7942_2297 tal transaldolase/EF-hand domain-containing protein 0.38 Synpcc7942_1310 cmpR ndhF3 operon transcriptional regulator — —
Variovorax sp. OAS795 0.53 ABID97_RS07095 transaldolase 0.30 ABID97_RS24450 LysR family transcriptional regulator low > 91
Rhodospirillum rubrum S1H 0.49 Rru_A1357 Transaldolase AB (NCBI) 0.33 Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) low > 58

Not shown: 44 genomes with orthologs for AO353_00310 only; 8 genomes with orthologs for AO353_10035 only