| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS09765 | | amino acid permease | 1.0 | ABZR87_RS07535 | | amino acid ABC transporter ATP-binding protein | 0.29 | 13 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_01755 | | proline-specific permease | 0.85 | PS417_05545 | | amino acid ABC transporter ATP-binding protein | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS01810 | | amino acid permease | 0.85 | PFLU_RS05630 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS01810 | | amino acid permease | 0.85 | PFLU_RS05630 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.71 | RR42_RS14635 | | proline-specific permease | 0.92 | RR42_RS02590 | | amino acid ABC transporter ATP-binding protein | low | > 128 |
| Pseudomonas putida KT2440 | 0.70 | PP_5031 | | proline (histidine) APC transporter | 0.80 | PP_1068 | | glutamate / aspartate ABC transporter - ATP binding subunit | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.69 | Psyr_4834 | | histidine:proton symporter, AAT family | 0.85 | Psyr_3911 | | L-aspartate ABC transporter ATP-binding protein / L-glutamate ABC transporter ATP-binding protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.69 | Psyr_4834 | | histidine:proton symporter, AAT family | 0.85 | Psyr_3911 | | L-aspartate ABC transporter ATP-binding protein / L-glutamate ABC transporter ATP-binding protein | — | — |
| Serratia liquefaciens MT49 | 0.69 | IAI46_03655 | | amino acid permease | 0.74 | IAI46_05980 | | amino acid ABC transporter ATP-binding protein | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.69 | Pf1N1B4_1580 | | Histidine transport protein (permease) | 0.85 | Pf1N1B4_774 | | ABC transporter for L-asparagine and L-glutamate, ATPase component (from data) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.69 | PfGW456L13_318 | | Histidine transport protein (permease) | 0.85 | PfGW456L13_4773 | | ABC transporter for L-Asparagine and possibly other L-amino acids, putative ATPase component (from data) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.68 | AO353_12275 | | histidine permease (from data) | 0.86 | AO353_16275 | | ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, ATPase component (from data) | — | — |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS08745 | | proline-specific permease | 0.75 | BWI76_RS08095 | | arginine ABC transporter ATP-binding protein | low | > 92 |
| Enterobacter asburiae PDN3 | 0.60 | EX28DRAFT_2572 | | Gamma-aminobutyrate permease and related permeases | 0.77 | EX28DRAFT_2319 | | ABC-type polar amino acid transport system, ATPase component | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.60 | GFF4300 | | Proline-specific permease proY | 0.74 | GFF4570 | | Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.60 | MPMX20_00989 | | Proline-specific permease ProY | 0.77 | MPMX20_01303 | | Glutamine transport ATP-binding protein GlnQ | low | > 85 |
| Rahnella sp. WP5 | 0.59 | EX31_RS22070 | | proline-specific permease ProY | 0.74 | EX31_RS23160 | | amino acid ABC transporter ATP-binding protein | low | > 89 |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS05835 | | proline-specific permease ProY | 0.73 | DZA65_RS06600 | | amino acid ABC transporter ATP-binding protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS05510 | | proline-specific permease ProY | 0.73 | HGI48_RS06255 | | amino acid ABC transporter ATP-binding protein | low | > 71 |
| Pantoea sp. MT58 | 0.58 | IAI47_14830 | | proline-specific permease ProY | 0.75 | IAI47_13985 | | amino acid ABC transporter ATP-binding protein | low | > 76 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_07170 | proY | proline-specific permease ProY | 0.73 | HEPCGN_00960 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_03274 | | Proline-specific permease ProY | 0.73 | OHPLBJKB_03061 | | Glutamine transport ATP-binding protein GlnQ | low | > 73 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_22875 | proY | proline-specific permease ProY | 0.73 | BNILDI_21665 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | — | — |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_19435 | proY | proline-specific permease ProY | 0.73 | KEDOAH_20700 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_06585 | proY | proline-specific permease ProY | 0.73 | NIAGMN_05325 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | — | — |
| Escherichia coli BW25113 | 0.58 | b0402 | proY | predicted cryptic proline transporter (NCBI) | 0.73 | b0652 | gltL | glutamate and aspartate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_12185 | proY | proline-specific permease ProY | 0.73 | JDDGAC_10915 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | low | > 86 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_01460 | proY | proline-specific permease ProY | 0.73 | NOLOHH_23655 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | low | > 75 |
| Escherichia fergusonii Becca | 0.58 | EFB2_03655 | | Proline-specific permease ProY | 0.73 | EFB2_03447 | | Glutamine transport ATP-binding protein GlnQ | low | > 86 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS02425 | | proline-specific permease ProY | 0.73 | ECOLIN_RS03510 | | glutamate/aspartate ABC transporter ATP-binding protein GltL | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_08530 | proY | proline-specific permease ProY | 0.73 | OKFHMN_07270 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | low | > 80 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_27755 | proY | proline-specific permease ProY | 0.73 | MCAODC_26485 | gltL | glutamate/aspartate ABC transporter ATP-binding protein GltL | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS16015 | | proline-specific permease ProY | 0.74 | HER17_RS15205 | | amino acid ABC transporter ATP-binding protein | low | > 75 |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS05450 | | proline-specific permease ProY | 0.73 | DDA3937_RS06210 | | amino acid ABC transporter ATP-binding protein | low | > 74 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_03490 | | Proline-specific permease ProY | 0.85 | PFR28_03374 | | Glutamine transport ATP-binding protein GlnQ | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_5459 | | D-serine/D-alanine/glycine transporter | 0.85 | Pf6N2E2_5567 | | Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_17670 | | L-alanine and D-alanine permease (from data) | 0.85 | AO356_18215 | | amino acid ABC transporter ATP-binding protein | — | — |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS10320 | | amino acid permease | 0.83 | ABCV34_RS14445 | | amino acid ABC transporter ATP-binding protein | low | > 48 |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS22065 | | amino acid permease | 0.94 | UW163_RS02015 | | amino acid ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS20930 | | amino acid permease | 0.94 | RALBFv3_RS11570 | | amino acid ABC transporter ATP-binding protein | — | — |
| Acinetobacter radioresistens SK82 | 0.41 | MPMX26_01474 | | Aromatic amino acid transport protein AroP | 0.78 | MPMX26_00675 | | Glutamine transport ATP-binding protein GlnQ | — | — |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS15500 | | aromatic amino acid transporter | 0.78 | BPHYT_RS16685 | | arginine ABC transporter ATP-binding protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS03190 | | amino acid permease | 0.82 | QEN71_RS26870 | | amino acid ABC transporter ATP-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_04042 | | phenylacetate transporter (from data) | 0.78 | H281DRAFT_04267 | | L-glutamate ABC transporter ATP-binding protein /L-aspartate ABC transporter ATP-binding protein | — | — |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_003265 | | aromatic amino acid transport protein AroP | 0.78 | ABIE53_003507 | | glutamate/aspartate transport system ATP-binding protein | — | — |
| Pseudomonas sp. S08-1 | 0.39 | OH686_21130 | | Aromatic amino acid transport protein AroP | 0.82 | OH686_13335 | | Glutamate/aspartate ABC transporter, ATP-binding protein GltL | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu3792 | | L-asparagine permease | 0.70 | Atu4235 | | amino acid ABC transporter ATPase/permease | low | > 89 |
Not shown: 11 genomes with orthologs for ABZR87_RS09765 only; 10 genomes with orthologs for ABZR87_RS07535 only