Conservation of cofitness between DvMF_2488 and DvMF_0110 in Desulfovibrio vulgaris Miyazaki F

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Miyazaki F 1.0 DvMF_2488 phosphate binding protein (RefSeq) 1.0 DvMF_0110 ATP-dependent Clp protease, proteolytic subunit ClpP (RefSeq) 0.26 12
Desulfovibrio vulgaris Hildenborough JW710 0.61 DVU2667 pstS phosphate ABC transporter, periplasmic phosphate-binding protein (TIGR) 0.84 DVU1335 clpP ATP-dependent Clp protease, proteolytic subunit (TIGR) low > 55
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_14370 phosphate ABC transporter substrate-binding protein 0.65 CSW01_09615 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
Bacteroides thetaiotaomicron VPI-5482 0.27 BT1324 phosphate ABC transporter, phosphate-binding protein (NCBI ptt file) 0.52 BT3842 ATP-dependent Clp protease proteolytic subunit 2 (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.26 BACOVA_00601 phosphate binding protein 0.52 BACOVA_00335 endopeptidase Clp
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS20380 PstS family phosphate ABC transporter substrate-binding protein 0.51 ABI39_RS02330 ATP-dependent Clp endopeptidase proteolytic subunit ClpP
Shewanella oneidensis MR-1 0.25 SO4292 pstS phosphate ABC transporter, periplasmic phosphate-binding protein (NCBI ptt file) 0.64 SO1794 clpP ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) low > 76
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS06585 PstS family phosphate ABC transporter substrate-binding protein 0.51 HMPREF1058_RS03085 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 67
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS04345 phosphate ABC transporter substrate-binding protein 0.53 HMPREF1078_RS17050 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 61
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS29770 phosphate ABC transporter substrate-binding protein PstS 0.64 PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 109
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_09905 phosphate-binding protein 0.65 AO353_20175 ATP-dependent Clp protease proteolytic subunit low > 101
Pseudomonas fluorescens SBW25 0.22 PFLU_RS29770 phosphate ABC transporter substrate-binding protein PstS 0.64 PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 109
Pseudomonas simiae WCS417 0.22 PS417_28085 phosphate-binding protein 0.64 PS417_17235 Clp protease ClpP
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_5041 phosphate ABC transporter substrate-binding protein, PhoT family 0.66 Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP low > 86
Shewanella amazonensis SB2B 0.21 Sama_1076 phosphate-binding protein (RefSeq) 0.67 Sama_1224 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_5041 phosphate ABC transporter substrate-binding protein, PhoT family 0.66 Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP low > 86
Pseudomonas stutzeri RCH2 0.21 Psest_0219 phosphate binding protein 0.64 Psest_2287 ATP-dependent Clp protease, proteolytic subunit ClpP
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_4075 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.66 Pf6N2E2_2218 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) 0.34 31
Shewanella sp. ANA-3 0.20 Shewana3_2877 phosphate binding protein (RefSeq) 0.63 Shewana3_2661 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_2034 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.65 Pf1N1B4_3945 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
Shewanella loihica PV-4 0.20 Shew_2747 phosphate binding protein (RefSeq) 0.65 Shew_2508 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq)
Pseudomonas sp. RS175 0.20 PFR28_04489 Phosphate-binding protein PstS 0.66 PFR28_01228 ATP-dependent Clp protease proteolytic subunit
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_11045 phosphate-binding protein 0.66 AO356_01750 ATP-dependent Clp protease proteolytic subunit low > 104
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_753 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.64 PfGW456L13_2552 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) low > 87
Pectobacterium carotovorum WPP14 0.18 HER17_RS16030 phosphate ABC transporter substrate-binding protein 0.66 HER17_RS15850 ATP-dependent Clp endopeptidase proteolytic subunit ClpP
Kangiella aquimarina DSM 16071 0.17 B158DRAFT_0902 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) 0.62 B158DRAFT_1034 ATP-dependent Clp protease, proteolytic subunit ClpP low > 40
Dickeya dadantii 3937 0.17 DDA3937_RS05435 phosphate ABC transporter substrate-binding protein 0.67 DDA3937_RS05640 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 74
Dickeya dianthicola 67-19 0.16 HGI48_RS05495 phosphate ABC transporter substrate-binding protein 0.67 HGI48_RS05685 ATP-dependent Clp endopeptidase proteolytic subunit ClpP
Alteromonas macleodii MIT1002 0.16 MIT1002_00753 Phosphate-binding protein PstS 1 precursor 0.66 MIT1002_02760 ATP-dependent Clp protease proteolytic subunit precursor low > 70
Dickeya dianthicola ME23 0.16 DZA65_RS05820 phosphate ABC transporter substrate-binding protein 0.67 DZA65_RS06010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP
Pantoea sp. MT58 0.14 IAI47_14845 PstS family phosphate ABC transporter substrate-binding protein 0.65 IAI47_14655 ATP-dependent Clp endopeptidase proteolytic subunit ClpP
Serratia liquefaciens MT49 0.14 IAI46_04785 phosphate ABC transporter substrate-binding protein PstS family protein 0.65 IAI46_05010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP low > 86

Not shown: 2 genomes with orthologs for DvMF_2488 only; 67 genomes with orthologs for DvMF_0110 only