Conservation of cofitness between Shewana3_1742 and Shewana3_2766 in Shewanella sp. ANA-3

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1742 leucine dehydrogenase (RefSeq) 1.0 Shewana3_2766 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.77 2
Shewanella oneidensis MR-1 0.98 SO2638 ldh leucine dehydrogenase (NCBI ptt file) 0.94 SO1682 mmsB 3-hydroxyisobutyrate dehydrogenase (NCBI ptt file) 0.44 15
Shewanella amazonensis SB2B 0.91 Sama_2067 leucine dehydrogenase (RefSeq) 0.73 Sama_1380 3-hydroxyisobutyrate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.89 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) 0.76 Shew_1672 3-hydroxyisobutyrate dehydrogenase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.54 OH686_21125 Branched-chain amino acid dehydrogenase [deaminating] 0.52 OH686_05885 3-hydroxyisobutyrate dehydrogenase low > 80
Azospirillum brasilense Sp245 0.54 AZOBR_RS31975 amino acid dehydrogenase 0.42 AZOBR_RS26815 3-hydroxyisobutyrate dehydrogenase low > 97
Alteromonas macleodii MIT1002 0.52 MIT1002_01151 Leucine dehydrogenase 0.38 MIT1002_03327 3-hydroxyisobutyrate dehydrogenase low > 70
Pseudomonas stutzeri RCH2 0.51 Psest_3516 Leucine dehydrogenase (EC 1.4.1.9) (from data) 0.45 Psest_2438 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.22 28
Marinobacter adhaerens HP15 0.51 HP15_2623 leucine dehydrogenase 0.58 HP15_910 3-hydroxyisobutyrate dehydrogenase low > 73
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.3645.1 Leucine dehydrogenase (EC 1.4.1.9) 0.51 Xcc-8004.3685.1 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.48 38
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.36 CCNA_01416 3-hydroxyisobutyrate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.47 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.36 CCNA_01416 3-hydroxyisobutyrate dehydrogenase low > 66
Rhodospirillum rubrum S1H 0.45 Rru_A1040 Glu/Leu/Phe/Val dehydrogenase (NCBI) 0.33 Rru_A1833 3-hydroxyisobutyrate dehydrogenase (NCBI) low > 58
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS22850 amino acid dehydrogenase 0.43 RR42_RS28555 3-hydroxyisobutyrate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS15260 amino acid dehydrogenase 0.44 QEN71_RS12390 3-hydroxyisobutyrate dehydrogenase low > 153
Pseudomonas putida KT2440 0.40 PP_4617 leucine dehydrogenase 0.42 PP_4666 3-hydroxyisobutyrate dehydrogenase low > 96
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4958 Leucine dehydrogenase (EC 1.4.1.9) 0.42 PfGW456L13_5145 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) low > 87
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1021 Leucine dehydrogenase (EC 1.4.1.9) 0.42 Pf1N1B4_1228 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) low > 87
Phaeobacter inhibens DSM 17395 0.40 PGA1_c20500 leucine dehydrogenase Ldh 0.34 PGA1_c17360 3-hydroxyisobutyrate dehydrogenase MmsB low > 62
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15570 amino acid dehydrogenase 0.43 AO353_05985 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) low > 101
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.42 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.42 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.38 PS417_05040 amino acid dehydrogenase 0.41 PS417_23720 3-hydroxyisobutyrate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16845 amino acid dehydrogenase 0.43 AO356_07865 3-hydroxyisobutyrate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_5294 Leucine dehydrogenase (EC 1.4.1.9) 0.42 Pf6N2E2_3451 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) low > 103
Pseudomonas sp. RS175 0.38 PFR28_00225 Leucine dehydrogenase 0.43 PFR28_00014 3-hydroxyisobutyrate dehydrogenase low > 88
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_0110 Glutamate dehydrogenase/leucine dehydrogenase 0.42 Ga0059261_3686 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) low > 68

Not shown: 10 genomes with orthologs for Shewana3_1742 only; 43 genomes with orthologs for Shewana3_2766 only