Conservation of cofitness between Shewana3_0328 and Shewana3_0996 in Shewanella sp. ANA-3

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_0328 thioester dehydrase family protein (RefSeq) 1.0 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.88 5
Shewanella oneidensis MR-1 0.93 SO4381 thioester dehydrase family protein (NCBI ptt file) 1.00 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.54 Shew_3524 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (RefSeq) 0.93 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_3392 thioester dehydrase family protein (RefSeq) 0.95 Sama_2587 rRNA large subunit methyltransferase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0421 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 0.60 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH low > 40
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS18535 3-hydroxylacyl-ACP dehydratase 0.45 HSERO_RS17780 50S rRNA methyltransferase low > 78
Pseudomonas sp. S08-1 0.28 OH686_09965 3-hydroxydecanoyl-[ACP] dehydratase 0.59 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH low > 80
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_09215 3-hydroxylacyl-ACP dehydratase 0.58 AO356_15305 50S rRNA methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0424 conserved hypothetical protein 0.60 Psyr_4366 Protein of unknown function DUF163 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0424 conserved hypothetical protein 0.60 Psyr_4366 Protein of unknown function DUF163 low > 86
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3727 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) 0.58 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH low > 103
Pseudomonas stutzeri RCH2 0.27 Psest_3702 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 0.56 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH low > 67
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_12615 3-hydroxylacyl-ACP dehydratase 0.58 AO353_06480 50S rRNA methyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_251 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) 0.58 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH — —
Pseudomonas sp. RS175 0.26 PFR28_05023 hypothetical protein 0.59 PFR28_03869 Ribosomal RNA large subunit methyltransferase H low > 88
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_1518 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) 0.58 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH — —
Pseudomonas fluorescens SBW25 0.25 PFLU_RS02085 hotdog family protein 0.59 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS02085 hotdog family protein 0.59 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas simiae WCS417 0.25 PS417_02040 3-hydroxylacyl-ACP dehydratase 0.59 PS417_24730 50S rRNA methyltransferase — —
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS31195 dehydratase 0.46 RR42_RS04710 50S rRNA methyltransferase low > 128
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS15140 beta-hydroxyacyl-ACP dehydratase 0.48 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H low > 109
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_03973 Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain 0.48 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS04700 3-hydroxylacyl-(acyl carrier protein) dehydratase 0.27 AZOBR_RS04060 50S rRNA methyltransferase low > 97
Ralstonia solanacearum GMI1000 0.21 RS_RS18885 beta-hydroxyacyl-ACP dehydratase 0.48 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Paraburkholderia graminis OAS925 0.21 ABIE53_003200 putative hotdog family 3-hydroxylacyl-ACP dehydratase 0.48 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS03860 hotdog family protein 0.49 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 153
Dickeya dianthicola 67-19 0.17 HGI48_RS21525 hotdog family protein 0.79 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Dickeya dianthicola ME23 0.17 DZA65_RS22505 hotdog family protein 0.78 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 75

Not shown: 0 genomes with orthologs for Shewana3_0328 only; 67 genomes with orthologs for Shewana3_0996 only